Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Urb1Q571H0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Urb1Q571H0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Urb1Q571H0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Urb1Q571H0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Urb1Q571H0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Urb1Q571H0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Urb1Q571H0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Urb1Q571H0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Urb1Q571H0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Urb1Q571H0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Urb1Q571H0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Urb1Q571H0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Urb1Q571H0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Urb1Q571H0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.25■□□□□ 0.51
Urb1Q571H0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Urb1Q571H0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Urb1Q571H0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Urb1Q571H0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.25■□□□□ 0.51
Urb1Q571H0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.25■□□□□ 0.51
Urb1Q571H0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Urb1Q571H0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Urb1Q571H0 Gm27801-201ENSMUST00000184174 223 ntBASIC18.25■□□□□ 0.51
Urb1Q571H0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Urb1Q571H0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Urb1Q571H0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Urb1Q571H0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.24■□□□□ 0.51
Urb1Q571H0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Urb1Q571H0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Urb1Q571H0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Urb1Q571H0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Urb1Q571H0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.24■□□□□ 0.51
Urb1Q571H0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Urb1Q571H0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Urb1Q571H0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.23■□□□□ 0.51
Urb1Q571H0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Urb1Q571H0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.23■□□□□ 0.51
Urb1Q571H0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Urb1Q571H0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.23■□□□□ 0.51
Urb1Q571H0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Urb1Q571H0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Urb1Q571H0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Urb1Q571H0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Urb1Q571H0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Urb1Q571H0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Urb1Q571H0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Urb1Q571H0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Urb1Q571H0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Urb1Q571H0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Urb1Q571H0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Urb1Q571H0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Gm7514-201ENSMUST00000209475 934 ntBASIC18.21■□□□□ 0.51
Urb1Q571H0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Urb1Q571H0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Urb1Q571H0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Urb1Q571H0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Urb1Q571H0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Urb1Q571H0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.2■□□□□ 0.5
Urb1Q571H0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Urb1Q571H0 Gm12527-201ENSMUST00000117967 564 ntBASIC18.2■□□□□ 0.5
Urb1Q571H0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Urb1Q571H0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Urb1Q571H0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Urb1Q571H0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Urb1Q571H0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Urb1Q571H0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Urb1Q571H0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Urb1Q571H0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Urb1Q571H0 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.19■□□□□ 0.5
Urb1Q571H0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Urb1Q571H0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Urb1Q571H0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.19■□□□□ 0.5
Urb1Q571H0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Urb1Q571H0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Urb1Q571H0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Urb1Q571H0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.18■□□□□ 0.5
Urb1Q571H0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Urb1Q571H0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Urb1Q571H0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Urb1Q571H0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Urb1Q571H0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Urb1Q571H0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Urb1Q571H0 Mir5133-201ENSMUST00000174955 77 ntBASIC18.18■□□□□ 0.5
Urb1Q571H0 Mir7071-201ENSMUST00000184847 69 ntBASIC18.18■□□□□ 0.5
Urb1Q571H0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Urb1Q571H0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Urb1Q571H0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Urb1Q571H0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Urb1Q571H0 Gm22240-201ENSMUST00000175225 82 ntBASIC18.17■□□□□ 0.5
Urb1Q571H0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms