Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.5■□□□□ 0.87
Bdp1Q571C7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bdp1Q571C7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.5■□□□□ 0.87
Bdp1Q571C7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Bdp1Q571C7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Bdp1Q571C7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Bdp1Q571C7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bdp1Q571C7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.49■□□□□ 0.87
Bdp1Q571C7 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.49■□□□□ 0.87
Bdp1Q571C7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.49■□□□□ 0.87
Bdp1Q571C7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Bdp1Q571C7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.49■□□□□ 0.87
Bdp1Q571C7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bdp1Q571C7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Bdp1Q571C7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Bdp1Q571C7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Bdp1Q571C7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Bdp1Q571C7 Gm13146-201ENSMUST00000118508 780 ntBASIC20.48■□□□□ 0.87
Bdp1Q571C7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.48■□□□□ 0.87
Bdp1Q571C7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.48■□□□□ 0.87
Bdp1Q571C7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Bdp1Q571C7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Bdp1Q571C7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Bdp1Q571C7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Bdp1Q571C7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.47■□□□□ 0.87
Bdp1Q571C7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.47■□□□□ 0.87
Bdp1Q571C7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Bdp1Q571C7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Bdp1Q571C7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Bdp1Q571C7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.47■□□□□ 0.87
Bdp1Q571C7 Gm6420-201ENSMUST00000193885 723 ntBASIC20.47■□□□□ 0.87
Bdp1Q571C7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Bdp1Q571C7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Bdp1Q571C7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.46■□□□□ 0.87
Bdp1Q571C7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Bdp1Q571C7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.46■□□□□ 0.87
Bdp1Q571C7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Bdp1Q571C7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Bdp1Q571C7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Bdp1Q571C7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Bdp1Q571C7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Bdp1Q571C7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Bdp1Q571C7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Bdp1Q571C7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Bdp1Q571C7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Bdp1Q571C7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.44■□□□□ 0.86
Bdp1Q571C7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Bdp1Q571C7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.43■□□□□ 0.86
Bdp1Q571C7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.43■□□□□ 0.86
Bdp1Q571C7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Bdp1Q571C7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.43■□□□□ 0.86
Bdp1Q571C7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Bdp1Q571C7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Bdp1Q571C7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Bdp1Q571C7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Bdp1Q571C7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Bdp1Q571C7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Bdp1Q571C7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Bdp1Q571C7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Bdp1Q571C7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.42■□□□□ 0.86
Bdp1Q571C7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Bdp1Q571C7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Bdp1Q571C7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Bdp1Q571C7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Bdp1Q571C7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Bdp1Q571C7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Bdp1Q571C7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.4■□□□□ 0.86
Bdp1Q571C7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Bdp1Q571C7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.4■□□□□ 0.86
Bdp1Q571C7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Bdp1Q571C7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Bdp1Q571C7 Gm7367-201ENSMUST00000057611 492 ntBASIC20.39■□□□□ 0.86
Bdp1Q571C7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Bdp1Q571C7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Bdp1Q571C7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Bdp1Q571C7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.39■□□□□ 0.85
Bdp1Q571C7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Bdp1Q571C7 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.39■□□□□ 0.85
Bdp1Q571C7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Bdp1Q571C7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms