Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rc3h1Q4VGL6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rc3h1Q4VGL6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rc3h1Q4VGL6 Gm10493-201ENSMUST00000097270 612 ntBASIC23.02■■□□□ 1.28
Rc3h1Q4VGL6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rc3h1Q4VGL6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rc3h1Q4VGL6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rc3h1Q4VGL6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.01■■□□□ 1.27
Rc3h1Q4VGL6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Rc3h1Q4VGL6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rc3h1Q4VGL6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Rc3h1Q4VGL6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
Rc3h1Q4VGL6 Gm10129-202ENSMUST00000193100 1316 ntBASIC23■■□□□ 1.27
Rc3h1Q4VGL6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rc3h1Q4VGL6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.99■■□□□ 1.27
Rc3h1Q4VGL6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
Rc3h1Q4VGL6 Gm26571-201ENSMUST00000181399 666 ntBASIC22.99■■□□□ 1.27
Rc3h1Q4VGL6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rc3h1Q4VGL6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rc3h1Q4VGL6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rc3h1Q4VGL6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rc3h1Q4VGL6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rc3h1Q4VGL6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rc3h1Q4VGL6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rc3h1Q4VGL6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rc3h1Q4VGL6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.98■■□□□ 1.27
Rc3h1Q4VGL6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rc3h1Q4VGL6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rc3h1Q4VGL6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.97■■□□□ 1.27
Rc3h1Q4VGL6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Rc3h1Q4VGL6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rc3h1Q4VGL6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rc3h1Q4VGL6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rc3h1Q4VGL6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.97■■□□□ 1.27
Rc3h1Q4VGL6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Rc3h1Q4VGL6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Rc3h1Q4VGL6 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rc3h1Q4VGL6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.94■■□□□ 1.26
Rc3h1Q4VGL6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.94■■□□□ 1.26
Rc3h1Q4VGL6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rc3h1Q4VGL6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.94■■□□□ 1.26
Rc3h1Q4VGL6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rc3h1Q4VGL6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rc3h1Q4VGL6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rc3h1Q4VGL6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.93■■□□□ 1.26
Rc3h1Q4VGL6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rc3h1Q4VGL6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rc3h1Q4VGL6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Rc3h1Q4VGL6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rc3h1Q4VGL6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms