Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Herc2Q4U2R1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Herc2Q4U2R1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Herc2Q4U2R1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Gm7461-201ENSMUST00000058918 827 ntBASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Gm13534-201ENSMUST00000121169 513 ntBASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Herc2Q4U2R1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Gm10698-201ENSMUST00000182663 604 ntBASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Herc2Q4U2R1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Herc2Q4U2R1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc2Q4U2R1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Herc2Q4U2R1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.12□□□□□ -0.47
Herc2Q4U2R1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.12□□□□□ -0.47
Herc2Q4U2R1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc2Q4U2R1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Herc2Q4U2R1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Herc2Q4U2R1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.11□□□□□ -0.47
Herc2Q4U2R1 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Mir5122-201ENSMUST00000175004 89 ntBASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Herc2Q4U2R1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.11□□□□□ -0.47
Herc2Q4U2R1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.1□□□□□ -0.47
Herc2Q4U2R1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Herc2Q4U2R1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc2Q4U2R1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Herc2Q4U2R1 Gm17971-201ENSMUST00000190239 806 ntBASIC12.08□□□□□ -0.47
Herc2Q4U2R1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.08□□□□□ -0.47
Herc2Q4U2R1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Herc2Q4U2R1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Herc2Q4U2R1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms