Protein–RNA interactions for Protein: Q3UWQ3

Ube2fb, NEDD8-conjugating enzyme UBE2F-B, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fbQ3UWQ3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube2fbQ3UWQ3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Spcs1-204ENSMUST00000226782 949 ntBASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ube2fbQ3UWQ3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Gm43530-201ENSMUST00000195920 274 ntBASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Gm7291-201ENSMUST00000199147 382 ntBASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Gm42569-201ENSMUST00000200539 472 ntBASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube2fbQ3UWQ3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.4■□□□□ 0.54
Ube2fbQ3UWQ3 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.4■□□□□ 0.54
Ube2fbQ3UWQ3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ube2fbQ3UWQ3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Ube2fbQ3UWQ3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ube2fbQ3UWQ3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube2fbQ3UWQ3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ube2fbQ3UWQ3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 Gm10493-201ENSMUST00000097270 612 ntBASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ube2fbQ3UWQ3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube2fbQ3UWQ3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Gm40848-201ENSMUST00000221998 324 ntBASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube2fbQ3UWQ3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube2fbQ3UWQ3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube2fbQ3UWQ3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ube2fbQ3UWQ3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms