Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cks1brtQ3UNC9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1brtQ3UNC9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cks1brtQ3UNC9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cks1brtQ3UNC9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cks1brtQ3UNC9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cks1brtQ3UNC9 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.33□□□□□ -0.11
Cks1brtQ3UNC9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cks1brtQ3UNC9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1brtQ3UNC9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Gm45855-201ENSMUST00000212546 880 ntBASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1brtQ3UNC9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1brtQ3UNC9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Gm4799-201ENSMUST00000095396 657 ntBASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1brtQ3UNC9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.29□□□□□ -0.12
Cks1brtQ3UNC9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms