Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp30Q3UN04 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp30Q3UN04 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp30Q3UN04 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp30Q3UN04 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Usp30Q3UN04 Gm42778-201ENSMUST00000199644 553 ntBASIC19.97■□□□□ 0.79
Usp30Q3UN04 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp30Q3UN04 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp30Q3UN04 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp30Q3UN04 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp30Q3UN04 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp30Q3UN04 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp30Q3UN04 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Usp30Q3UN04 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Usp30Q3UN04 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp30Q3UN04 AV356131-201ENSMUST00000206201 750 ntBASIC19.95■□□□□ 0.78
Usp30Q3UN04 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.94■□□□□ 0.78
Usp30Q3UN04 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.94■□□□□ 0.78
Usp30Q3UN04 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp30Q3UN04 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Gm27801-201ENSMUST00000184174 223 ntBASIC19.93■□□□□ 0.78
Usp30Q3UN04 Gm29257-201ENSMUST00000186115 639 ntBASIC19.93■□□□□ 0.78
Usp30Q3UN04 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.93■□□□□ 0.78
Usp30Q3UN04 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp30Q3UN04 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp30Q3UN04 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp30Q3UN04 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Usp30Q3UN04 Gm37179-201ENSMUST00000194862 823 ntBASIC19.92■□□□□ 0.78
Usp30Q3UN04 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp30Q3UN04 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp30Q3UN04 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
Usp30Q3UN04 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp30Q3UN04 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp30Q3UN04 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp30Q3UN04 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Usp30Q3UN04 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.91■□□□□ 0.78
Usp30Q3UN04 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp30Q3UN04 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp30Q3UN04 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp30Q3UN04 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.91■□□□□ 0.78
Usp30Q3UN04 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.9■□□□□ 0.78
Usp30Q3UN04 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp30Q3UN04 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.9■□□□□ 0.78
Usp30Q3UN04 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Usp30Q3UN04 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp30Q3UN04 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp30Q3UN04 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp30Q3UN04 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Usp30Q3UN04 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp30Q3UN04 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usp30Q3UN04 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms