Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Gm12933-201ENSMUST00000120203 872 ntBASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnrc6aQ3UHK8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Tnrc6aQ3UHK8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnrc6aQ3UHK8 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.52■□□□□ 0.56
Tnrc6aQ3UHK8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnrc6aQ3UHK8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnrc6aQ3UHK8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.52■□□□□ 0.56
Tnrc6aQ3UHK8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnrc6aQ3UHK8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.52■□□□□ 0.56
Tnrc6aQ3UHK8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnrc6aQ3UHK8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnrc6aQ3UHK8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.52■□□□□ 0.55
Tnrc6aQ3UHK8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.52■□□□□ 0.55
Tnrc6aQ3UHK8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnrc6aQ3UHK8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Tnrc6aQ3UHK8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tnrc6aQ3UHK8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Gm13234-201ENSMUST00000120010 747 ntBASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnrc6aQ3UHK8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Mir6236-201ENSMUST00000184437 123 ntBASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Gm42778-201ENSMUST00000199644 553 ntBASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tnrc6aQ3UHK8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc6aQ3UHK8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc6aQ3UHK8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Reep4-203ENSMUST00000226563 1444 ntBASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc6aQ3UHK8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms