Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Spg11Q3UHA3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Spg11Q3UHA3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Spg11Q3UHA3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Spg11Q3UHA3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Spg11Q3UHA3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Spg11Q3UHA3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Spg11Q3UHA3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Spg11Q3UHA3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Spg11Q3UHA3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Spg11Q3UHA3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Spg11Q3UHA3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Spg11Q3UHA3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Spg11Q3UHA3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Spg11Q3UHA3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Spg11Q3UHA3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Spg11Q3UHA3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Gm11249-201ENSMUST00000117071 859 ntBASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Gm6433-201ENSMUST00000118634 875 ntBASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Spg11Q3UHA3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.6■□□□□ 0.57
Spg11Q3UHA3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.59■□□□□ 0.57
Spg11Q3UHA3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Spg11Q3UHA3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Spg11Q3UHA3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Spg11Q3UHA3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Spg11Q3UHA3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Spg11Q3UHA3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Spg11Q3UHA3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Spg11Q3UHA3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Spg11Q3UHA3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms