Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cln6Q3U466 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cln6Q3U466 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cln6Q3U466 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cln6Q3U466 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cln6Q3U466 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cln6Q3U466 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cln6Q3U466 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cln6Q3U466 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cln6Q3U466 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cln6Q3U466 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cln6Q3U466 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.85■□□□□ 0.29
Cln6Q3U466 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cln6Q3U466 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cln6Q3U466 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cln6Q3U466 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cln6Q3U466 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cln6Q3U466 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.84■□□□□ 0.29
Cln6Q3U466 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cln6Q3U466 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cln6Q3U466 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cln6Q3U466 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cln6Q3U466 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cln6Q3U466 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.84■□□□□ 0.29
Cln6Q3U466 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cln6Q3U466 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cln6Q3U466 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cln6Q3U466 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cln6Q3U466 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cln6Q3U466 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cln6Q3U466 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.83■□□□□ 0.29
Cln6Q3U466 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.83■□□□□ 0.28
Cln6Q3U466 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cln6Q3U466 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cln6Q3U466 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.83■□□□□ 0.28
Cln6Q3U466 Gm10399-202ENSMUST00000202768 748 ntBASIC16.83■□□□□ 0.28
Cln6Q3U466 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cln6Q3U466 Cap2-205ENSMUST00000225824 1634 ntBASIC16.83■□□□□ 0.28
Cln6Q3U466 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.83■□□□□ 0.28
Cln6Q3U466 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cln6Q3U466 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cln6Q3U466 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cln6Q3U466 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cln6Q3U466 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Cln6Q3U466 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cln6Q3U466 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cln6Q3U466 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.82■□□□□ 0.28
Cln6Q3U466 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cln6Q3U466 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cln6Q3U466 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cln6Q3U466 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cln6Q3U466 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Cln6Q3U466 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cln6Q3U466 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Cln6Q3U466 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.81■□□□□ 0.28
Cln6Q3U466 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cln6Q3U466 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cln6Q3U466 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.8■□□□□ 0.28
Cln6Q3U466 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.8■□□□□ 0.28
Cln6Q3U466 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.8■□□□□ 0.28
Cln6Q3U466 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cln6Q3U466 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cln6Q3U466 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cln6Q3U466 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cln6Q3U466 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cln6Q3U466 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cln6Q3U466 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cln6Q3U466 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cln6Q3U466 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cln6Q3U466 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cln6Q3U466 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.79■□□□□ 0.28
Cln6Q3U466 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cln6Q3U466 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.79■□□□□ 0.28
Cln6Q3U466 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cln6Q3U466 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.78■□□□□ 0.28
Cln6Q3U466 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cln6Q3U466 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cln6Q3U466 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cln6Q3U466 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cln6Q3U466 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cln6Q3U466 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms