Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cul4aQ3TCH7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cul4aQ3TCH7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cul4aQ3TCH7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cul4aQ3TCH7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.84■□□□□ 0.93
Cul4aQ3TCH7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cul4aQ3TCH7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cul4aQ3TCH7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cul4aQ3TCH7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cul4aQ3TCH7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cul4aQ3TCH7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cul4aQ3TCH7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cul4aQ3TCH7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cul4aQ3TCH7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cul4aQ3TCH7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.81■□□□□ 0.92
Cul4aQ3TCH7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cul4aQ3TCH7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cul4aQ3TCH7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cul4aQ3TCH7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cul4aQ3TCH7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cul4aQ3TCH7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cul4aQ3TCH7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cul4aQ3TCH7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cul4aQ3TCH7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cul4aQ3TCH7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cul4aQ3TCH7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cul4aQ3TCH7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cul4aQ3TCH7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cul4aQ3TCH7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.77■□□□□ 0.91
Cul4aQ3TCH7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 134.1 ms