Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.89□□□□□ -0.03
Hspg2Q05793 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.89□□□□□ -0.03
Hspg2Q05793 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.89□□□□□ -0.03
Hspg2Q05793 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hspg2Q05793 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hspg2Q05793 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Hspg2Q05793 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hspg2Q05793 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hspg2Q05793 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.88□□□□□ -0.03
Hspg2Q05793 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.88□□□□□ -0.03
Hspg2Q05793 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hspg2Q05793 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hspg2Q05793 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hspg2Q05793 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hspg2Q05793 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hspg2Q05793 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hspg2Q05793 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hspg2Q05793 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hspg2Q05793 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.87□□□□□ -0.03
Hspg2Q05793 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hspg2Q05793 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hspg2Q05793 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.87□□□□□ -0.03
Hspg2Q05793 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hspg2Q05793 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hspg2Q05793 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hspg2Q05793 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hspg2Q05793 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hspg2Q05793 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hspg2Q05793 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.87□□□□□ -0.03
Hspg2Q05793 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hspg2Q05793 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hspg2Q05793 Gm11421-201ENSMUST00000122124 294 ntBASIC14.87□□□□□ -0.03
Hspg2Q05793 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hspg2Q05793 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.87□□□□□ -0.03
Hspg2Q05793 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Hspg2Q05793 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hspg2Q05793 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hspg2Q05793 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hspg2Q05793 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hspg2Q05793 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.86□□□□□ -0.03
Hspg2Q05793 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hspg2Q05793 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hspg2Q05793 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hspg2Q05793 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hspg2Q05793 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hspg2Q05793 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hspg2Q05793 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.86□□□□□ -0.03
Hspg2Q05793 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hspg2Q05793 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.86□□□□□ -0.03
Hspg2Q05793 Mir5133-201ENSMUST00000174955 77 ntBASIC14.86□□□□□ -0.03
Hspg2Q05793 Gm20049-201ENSMUST00000219950 730 ntBASIC14.86□□□□□ -0.03
Hspg2Q05793 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 Gm37856-201ENSMUST00000191634 999 ntBASIC14.85□□□□□ -0.03
Hspg2Q05793 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.85□□□□□ -0.03
Hspg2Q05793 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hspg2Q05793 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Hspg2Q05793 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Hspg2Q05793 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.84□□□□□ -0.03
Hspg2Q05793 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.84□□□□□ -0.03
Hspg2Q05793 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hspg2Q05793 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.84□□□□□ -0.03
Hspg2Q05793 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hspg2Q05793 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.83□□□□□ -0.03
Hspg2Q05793 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hspg2Q05793 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.83□□□□□ -0.03
Hspg2Q05793 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hspg2Q05793 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.83□□□□□ -0.04
Hspg2Q05793 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.83□□□□□ -0.04
Hspg2Q05793 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hspg2Q05793 Gm9988-201ENSMUST00000069786 435 ntBASIC14.83□□□□□ -0.04
Hspg2Q05793 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hspg2Q05793 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.82□□□□□ -0.04
Hspg2Q05793 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.82□□□□□ -0.04
Hspg2Q05793 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hspg2Q05793 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hspg2Q05793 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hspg2Q05793 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hspg2Q05793 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hspg2Q05793 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hspg2Q05793 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.82□□□□□ -0.04
Hspg2Q05793 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.82□□□□□ -0.04
Hspg2Q05793 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hspg2Q05793 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.81□□□□□ -0.04
Hspg2Q05793 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms