Protein–RNA interactions for Protein: Q04207

Rela, Transcription factor p65, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RelaQ04207 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.6■□□□□ 0.89
RelaQ04207 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RelaQ04207 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.6■□□□□ 0.89
RelaQ04207 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RelaQ04207 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RelaQ04207 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RelaQ04207 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RelaQ04207 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RelaQ04207 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.59■□□□□ 0.89
RelaQ04207 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.59■□□□□ 0.89
RelaQ04207 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RelaQ04207 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RelaQ04207 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RelaQ04207 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RelaQ04207 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RelaQ04207 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RelaQ04207 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.58■□□□□ 0.88
RelaQ04207 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RelaQ04207 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RelaQ04207 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RelaQ04207 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RelaQ04207 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
RelaQ04207 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.57■□□□□ 0.88
RelaQ04207 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.57■□□□□ 0.88
RelaQ04207 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RelaQ04207 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RelaQ04207 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RelaQ04207 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RelaQ04207 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RelaQ04207 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RelaQ04207 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RelaQ04207 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RelaQ04207 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.56■□□□□ 0.88
RelaQ04207 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RelaQ04207 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.56■□□□□ 0.88
RelaQ04207 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RelaQ04207 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RelaQ04207 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RelaQ04207 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RelaQ04207 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RelaQ04207 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RelaQ04207 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RelaQ04207 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.55■□□□□ 0.88
RelaQ04207 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.55■□□□□ 0.88
RelaQ04207 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RelaQ04207 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RelaQ04207 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RelaQ04207 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.55■□□□□ 0.88
RelaQ04207 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RelaQ04207 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RelaQ04207 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RelaQ04207 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RelaQ04207 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
RelaQ04207 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RelaQ04207 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.54■□□□□ 0.88
RelaQ04207 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RelaQ04207 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RelaQ04207 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.54■□□□□ 0.88
RelaQ04207 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.54■□□□□ 0.88
RelaQ04207 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RelaQ04207 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RelaQ04207 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.54■□□□□ 0.88
RelaQ04207 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RelaQ04207 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RelaQ04207 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RelaQ04207 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.54■□□□□ 0.88
RelaQ04207 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RelaQ04207 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.53■□□□□ 0.88
RelaQ04207 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RelaQ04207 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RelaQ04207 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RelaQ04207 Golph3-205ENSMUST00000228671 2842 ntBASIC20.53■□□□□ 0.88
RelaQ04207 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RelaQ04207 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RelaQ04207 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RelaQ04207 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RelaQ04207 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
RelaQ04207 Gm22238-201ENSMUST00000175222 88 ntBASIC20.52■□□□□ 0.88
RelaQ04207 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RelaQ04207 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RelaQ04207 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RelaQ04207 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RelaQ04207 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.51■□□□□ 0.87
RelaQ04207 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RelaQ04207 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.51■□□□□ 0.87
RelaQ04207 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RelaQ04207 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RelaQ04207 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RelaQ04207 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RelaQ04207 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms