Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh6P97326 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.12■□□□□ 0.81
Cdh6P97326 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Cdh6P97326 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh6P97326 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh6P97326 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cdh6P97326 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cdh6P97326 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.11■□□□□ 0.81
Cdh6P97326 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh6P97326 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.1■□□□□ 0.81
Cdh6P97326 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cdh6P97326 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh6P97326 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh6P97326 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh6P97326 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.09■□□□□ 0.81
Cdh6P97326 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cdh6P97326 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cdh6P97326 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh6P97326 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh6P97326 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.09■□□□□ 0.81
Cdh6P97326 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh6P97326 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh6P97326 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh6P97326 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh6P97326 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh6P97326 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh6P97326 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh6P97326 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cdh6P97326 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh6P97326 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh6P97326 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.08■□□□□ 0.81
Cdh6P97326 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.08■□□□□ 0.81
Cdh6P97326 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh6P97326 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh6P97326 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.08■□□□□ 0.81
Cdh6P97326 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh6P97326 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh6P97326 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh6P97326 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh6P97326 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cdh6P97326 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cdh6P97326 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cdh6P97326 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cdh6P97326 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh6P97326 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.07■□□□□ 0.8
Cdh6P97326 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cdh6P97326 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh6P97326 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.07■□□□□ 0.8
Cdh6P97326 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cdh6P97326 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cdh6P97326 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh6P97326 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh6P97326 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh6P97326 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh6P97326 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh6P97326 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh6P97326 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh6P97326 Gm27454-201ENSMUST00000185090 204 ntBASIC20.06■□□□□ 0.8
Cdh6P97326 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cdh6P97326 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh6P97326 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh6P97326 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cdh6P97326 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh6P97326 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh6P97326 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.05■□□□□ 0.8
Cdh6P97326 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cdh6P97326 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cdh6P97326 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh6P97326 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.05■□□□□ 0.8
Cdh6P97326 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh6P97326 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.04■□□□□ 0.8
Cdh6P97326 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
Cdh6P97326 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cdh6P97326 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms