Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ldb1P70662 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ldb1P70662 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.76■□□□□ 0.75
Ldb1P70662 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.76■□□□□ 0.75
Ldb1P70662 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ldb1P70662 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ldb1P70662 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ldb1P70662 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb1P70662 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.75■□□□□ 0.75
Ldb1P70662 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Ldb1P70662 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb1P70662 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb1P70662 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb1P70662 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb1P70662 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb1P70662 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.75■□□□□ 0.75
Ldb1P70662 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb1P70662 Golgb1-201ENSMUST00000023534 498 ntBASIC19.75■□□□□ 0.75
Ldb1P70662 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ldb1P70662 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Ldb1P70662 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ldb1P70662 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ldb1P70662 Golph3-202ENSMUST00000226517 2359 ntBASIC19.73■□□□□ 0.75
Ldb1P70662 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ldb1P70662 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb1P70662 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb1P70662 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ldb1P70662 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb1P70662 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb1P70662 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.73■□□□□ 0.75
Ldb1P70662 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb1P70662 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb1P70662 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ldb1P70662 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ldb1P70662 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb1P70662 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb1P70662 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.72■□□□□ 0.75
Ldb1P70662 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb1P70662 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb1P70662 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ldb1P70662 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ldb1P70662 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ldb1P70662 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb1P70662 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb1P70662 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ldb1P70662 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.71■□□□□ 0.75
Ldb1P70662 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.71■□□□□ 0.75
Ldb1P70662 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb1P70662 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb1P70662 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb1P70662 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ldb1P70662 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb1P70662 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb1P70662 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb1P70662 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ldb1P70662 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb1P70662 Gm12922-201ENSMUST00000120626 809 ntBASIC19.7■□□□□ 0.74
Ldb1P70662 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.7■□□□□ 0.74
Ldb1P70662 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb1P70662 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ldb1P70662 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ldb1P70662 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ldb1P70662 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
Ldb1P70662 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ldb1P70662 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.69■□□□□ 0.74
Ldb1P70662 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb1P70662 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ldb1P70662 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb1P70662 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb1P70662 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb1P70662 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb1P70662 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.68■□□□□ 0.74
Ldb1P70662 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb1P70662 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ldb1P70662 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.68■□□□□ 0.74
Ldb1P70662 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ldb1P70662 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ldb1P70662 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms