Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx1P63006 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lhx1P63006 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Lhx1P63006 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Lhx1P63006 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx1P63006 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx1P63006 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.54■□□□□ 0.72
Lhx1P63006 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Lhx1P63006 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.54■□□□□ 0.72
Lhx1P63006 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx1P63006 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Lhx1P63006 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lhx1P63006 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx1P63006 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx1P63006 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx1P63006 Gm43060-201ENSMUST00000200621 289 ntBASIC19.53■□□□□ 0.72
Lhx1P63006 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lhx1P63006 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lhx1P63006 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lhx1P63006 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.52■□□□□ 0.72
Lhx1P63006 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx1P63006 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Lhx1P63006 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lhx1P63006 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx1P63006 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lhx1P63006 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx1P63006 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx1P63006 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx1P63006 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx1P63006 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx1P63006 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx1P63006 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Lhx1P63006 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Gm11421-201ENSMUST00000122124 294 ntBASIC19.5■□□□□ 0.71
Lhx1P63006 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.5■□□□□ 0.71
Lhx1P63006 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.5■□□□□ 0.71
Lhx1P63006 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx1P63006 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Lhx1P63006 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.49■□□□□ 0.71
Lhx1P63006 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.49■□□□□ 0.71
Lhx1P63006 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Lhx1P63006 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx1P63006 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx1P63006 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.49■□□□□ 0.71
Lhx1P63006 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx1P63006 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Lhx1P63006 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.48■□□□□ 0.71
Lhx1P63006 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Lhx1P63006 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.48■□□□□ 0.71
Lhx1P63006 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.48■□□□□ 0.71
Lhx1P63006 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lhx1P63006 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Gm40848-201ENSMUST00000221998 324 ntBASIC19.48■□□□□ 0.71
Lhx1P63006 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lhx1P63006 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.48■□□□□ 0.71
Lhx1P63006 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx1P63006 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx1P63006 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lhx1P63006 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx1P63006 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx1P63006 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Lhx1P63006 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.47■□□□□ 0.71
Lhx1P63006 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx1P63006 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.46■□□□□ 0.71
Lhx1P63006 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx1P63006 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx1P63006 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lhx1P63006 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.45■□□□□ 0.7
Lhx1P63006 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx1P63006 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx1P63006 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx1P63006 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.45■□□□□ 0.7
Lhx1P63006 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.45■□□□□ 0.7
Lhx1P63006 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx1P63006 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx1P63006 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms