Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ybx1P62960 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.42■□□□□ 0.86
Ybx1P62960 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ybx1P62960 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ybx1P62960 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ybx1P62960 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ybx1P62960 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ybx1P62960 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ybx1P62960 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.41■□□□□ 0.86
Ybx1P62960 Gm9988-201ENSMUST00000069786 435 ntBASIC20.41■□□□□ 0.86
Ybx1P62960 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ybx1P62960 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ybx1P62960 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ybx1P62960 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.41■□□□□ 0.86
Ybx1P62960 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Ybx1P62960 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.4■□□□□ 0.86
Ybx1P62960 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.4■□□□□ 0.86
Ybx1P62960 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.4■□□□□ 0.86
Ybx1P62960 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ybx1P62960 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ybx1P62960 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ybx1P62960 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ybx1P62960 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ybx1P62960 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ybx1P62960 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ybx1P62960 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ybx1P62960 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ybx1P62960 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ybx1P62960 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.39■□□□□ 0.85
Ybx1P62960 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ybx1P62960 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ybx1P62960 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ybx1P62960 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ybx1P62960 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ybx1P62960 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ybx1P62960 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ybx1P62960 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.38■□□□□ 0.85
Ybx1P62960 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ybx1P62960 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ybx1P62960 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ybx1P62960 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ybx1P62960 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ybx1P62960 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ybx1P62960 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ybx1P62960 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ybx1P62960 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.37■□□□□ 0.85
Ybx1P62960 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ybx1P62960 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.37■□□□□ 0.85
Ybx1P62960 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ybx1P62960 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ybx1P62960 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ybx1P62960 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ybx1P62960 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ybx1P62960 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ybx1P62960 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ybx1P62960 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.35■□□□□ 0.85
Ybx1P62960 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ybx1P62960 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Ybx1P62960 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.35■□□□□ 0.85
Ybx1P62960 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.35■□□□□ 0.85
Ybx1P62960 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.35■□□□□ 0.85
Ybx1P62960 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ybx1P62960 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ybx1P62960 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ybx1P62960 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ybx1P62960 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
Ybx1P62960 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ybx1P62960 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ybx1P62960 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.34■□□□□ 0.85
Ybx1P62960 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ybx1P62960 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ybx1P62960 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ybx1P62960 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ybx1P62960 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.34■□□□□ 0.85
Ybx1P62960 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.34■□□□□ 0.85
Ybx1P62960 Reep4-203ENSMUST00000226563 1444 ntBASIC20.34■□□□□ 0.85
Ybx1P62960 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
Ybx1P62960 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ybx1P62960 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ybx1P62960 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Ybx1P62960 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ybx1P62960 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Ybx1P62960 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ybx1P62960 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.33■□□□□ 0.85
Ybx1P62960 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Ybx1P62960 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ybx1P62960 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ybx1P62960 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Ybx1P62960 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ybx1P62960 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ybx1P62960 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ybx1P62960 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ybx1P62960 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ybx1P62960 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.32■□□□□ 0.84
Ybx1P62960 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ybx1P62960 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.32■□□□□ 0.84
Ybx1P62960 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.32■□□□□ 0.84
Ybx1P62960 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.32■□□□□ 0.84
Ybx1P62960 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.32■□□□□ 0.84
Ybx1P62960 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms