Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a1P61620 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a1P61620 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a1P61620 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a1P61620 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a1P61620 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a1P61620 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a1P61620 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Sec61a1P61620 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a1P61620 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Sec61a1P61620 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a1P61620 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.32■□□□□ 0.36
Sec61a1P61620 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a1P61620 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a1P61620 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sec61a1P61620 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Sec61a1P61620 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.31■□□□□ 0.36
Sec61a1P61620 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Sec61a1P61620 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a1P61620 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.3■□□□□ 0.36
Sec61a1P61620 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sec61a1P61620 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.3■□□□□ 0.36
Sec61a1P61620 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a1P61620 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sec61a1P61620 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.29■□□□□ 0.36
Sec61a1P61620 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a1P61620 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Sec61a1P61620 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a1P61620 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a1P61620 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a1P61620 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.29■□□□□ 0.36
Sec61a1P61620 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sec61a1P61620 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sec61a1P61620 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.28■□□□□ 0.36
Sec61a1P61620 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a1P61620 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a1P61620 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a1P61620 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a1P61620 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a1P61620 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a1P61620 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.27■□□□□ 0.36
Sec61a1P61620 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.27■□□□□ 0.36
Sec61a1P61620 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sec61a1P61620 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sec61a1P61620 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sec61a1P61620 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sec61a1P61620 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Sec61a1P61620 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sec61a1P61620 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sec61a1P61620 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sec61a1P61620 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a1P61620 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.26■□□□□ 0.35
Sec61a1P61620 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a1P61620 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sec61a1P61620 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sec61a1P61620 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a1P61620 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a1P61620 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a1P61620 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a1P61620 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a1P61620 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a1P61620 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a1P61620 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms