Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Tpm1P58771 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Tpm1P58771 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tpm1P58771 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tpm1P58771 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tpm1P58771 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Tpm1P58771 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tpm1P58771 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.04■■□□□ 1.12
Tpm1P58771 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Tpm1P58771 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Tpm1P58771 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tpm1P58771 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Tpm1P58771 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.04■■□□□ 1.12
Tpm1P58771 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.04■■□□□ 1.12
Tpm1P58771 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Tpm1P58771 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tpm1P58771 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tpm1P58771 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tpm1P58771 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tpm1P58771 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Tpm1P58771 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC22.03■■□□□ 1.12
Tpm1P58771 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tpm1P58771 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.03■■□□□ 1.12
Tpm1P58771 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.03■■□□□ 1.12
Tpm1P58771 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.03■■□□□ 1.12
Tpm1P58771 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tpm1P58771 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tpm1P58771 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tpm1P58771 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tpm1P58771 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Tpm1P58771 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
Tpm1P58771 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tpm1P58771 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tpm1P58771 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tpm1P58771 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Tpm1P58771 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.01■■□□□ 1.11
Tpm1P58771 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Tpm1P58771 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Tpm1P58771 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tpm1P58771 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.01■■□□□ 1.11
Tpm1P58771 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tpm1P58771 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC22.01■■□□□ 1.11
Tpm1P58771 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tpm1P58771 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Tpm1P58771 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Tpm1P58771 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22■■□□□ 1.11
Tpm1P58771 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tpm1P58771 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC22■■□□□ 1.11
Tpm1P58771 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Tpm1P58771 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tpm1P58771 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.99■■□□□ 1.11
Tpm1P58771 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.99■■□□□ 1.11
Tpm1P58771 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.99■■□□□ 1.11
Tpm1P58771 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.99■■□□□ 1.11
Tpm1P58771 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.99■■□□□ 1.11
Tpm1P58771 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tpm1P58771 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tpm1P58771 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tpm1P58771 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tpm1P58771 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tpm1P58771 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Tpm1P58771 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Tpm1P58771 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tpm1P58771 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tpm1P58771 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tpm1P58771 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tpm1P58771 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Tpm1P58771 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.97■■□□□ 1.11
Tpm1P58771 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tpm1P58771 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.96■■□□□ 1.11
Tpm1P58771 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tpm1P58771 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tpm1P58771 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Tpm1P58771 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.96■■□□□ 1.11
Tpm1P58771 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.96■■□□□ 1.11
Tpm1P58771 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tpm1P58771 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Tpm1P58771 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tpm1P58771 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tpm1P58771 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tpm1P58771 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tpm1P58771 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tpm1P58771 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms