Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lim2P56563 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.87■□□□□ 0.77
Lim2P56563 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lim2P56563 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.86■□□□□ 0.77
Lim2P56563 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lim2P56563 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lim2P56563 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lim2P56563 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lim2P56563 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lim2P56563 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
Lim2P56563 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Lim2P56563 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Lim2P56563 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lim2P56563 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lim2P56563 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lim2P56563 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lim2P56563 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lim2P56563 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Lim2P56563 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lim2P56563 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lim2P56563 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.84■□□□□ 0.77
Lim2P56563 Mir6236-201ENSMUST00000184437 123 ntBASIC19.84■□□□□ 0.77
Lim2P56563 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.84■□□□□ 0.77
Lim2P56563 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lim2P56563 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lim2P56563 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lim2P56563 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lim2P56563 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lim2P56563 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lim2P56563 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lim2P56563 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Lim2P56563 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lim2P56563 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lim2P56563 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lim2P56563 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Lim2P56563 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Lim2P56563 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lim2P56563 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lim2P56563 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lim2P56563 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Lim2P56563 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.83■□□□□ 0.76
Lim2P56563 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lim2P56563 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lim2P56563 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lim2P56563 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.82■□□□□ 0.76
Lim2P56563 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lim2P56563 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Lim2P56563 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lim2P56563 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lim2P56563 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lim2P56563 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lim2P56563 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Lim2P56563 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lim2P56563 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.81■□□□□ 0.76
Lim2P56563 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.81■□□□□ 0.76
Lim2P56563 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lim2P56563 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lim2P56563 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lim2P56563 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lim2P56563 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lim2P56563 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lim2P56563 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lim2P56563 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.8■□□□□ 0.76
Lim2P56563 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Lim2P56563 Mir7075-201ENSMUST00000184187 82 ntBASIC19.8■□□□□ 0.76
Lim2P56563 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Lim2P56563 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Lim2P56563 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lim2P56563 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lim2P56563 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lim2P56563 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lim2P56563 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lim2P56563 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lim2P56563 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lim2P56563 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lim2P56563 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Lim2P56563 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lim2P56563 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lim2P56563 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lim2P56563 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lim2P56563 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.78■□□□□ 0.76
Lim2P56563 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Lim2P56563 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lim2P56563 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Lim2P56563 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lim2P56563 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Lim2P56563 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Lim2P56563 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lim2P56563 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms