Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.24■■□□□ 1.15
Hmgcs2P54869 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.24■■□□□ 1.15
Hmgcs2P54869 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcs2P54869 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.23■■□□□ 1.15
Hmgcs2P54869 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hmgcs2P54869 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hmgcs2P54869 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcs2P54869 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcs2P54869 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcs2P54869 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Hmgcs2P54869 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcs2P54869 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcs2P54869 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcs2P54869 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcs2P54869 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcs2P54869 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.21■■□□□ 1.15
Hmgcs2P54869 Gm7514-201ENSMUST00000209475 934 ntBASIC22.21■■□□□ 1.15
Hmgcs2P54869 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
Hmgcs2P54869 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Hmgcs2P54869 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmgcs2P54869 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmgcs2P54869 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Hmgcs2P54869 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.2■■□□□ 1.14
Hmgcs2P54869 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Hmgcs2P54869 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hmgcs2P54869 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hmgcs2P54869 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hmgcs2P54869 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcs2P54869 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcs2P54869 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcs2P54869 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcs2P54869 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Hmgcs2P54869 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Hmgcs2P54869 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcs2P54869 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hmgcs2P54869 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hmgcs2P54869 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hmgcs2P54869 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.18■■□□□ 1.14
Hmgcs2P54869 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hmgcs2P54869 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmgcs2P54869 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Hmgcs2P54869 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.17■■□□□ 1.14
Hmgcs2P54869 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Hmgcs2P54869 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Hmgcs2P54869 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmgcs2P54869 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmgcs2P54869 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hmgcs2P54869 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmgcs2P54869 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Hmgcs2P54869 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmgcs2P54869 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hmgcs2P54869 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmgcs2P54869 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Hmgcs2P54869 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hmgcs2P54869 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hmgcs2P54869 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.15■■□□□ 1.14
Hmgcs2P54869 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Hmgcs2P54869 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hmgcs2P54869 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Hmgcs2P54869 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Hmgcs2P54869 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Hmgcs2P54869 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Hmgcs2P54869 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs2P54869 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.13■■□□□ 1.13
Hmgcs2P54869 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmgcs2P54869 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmgcs2P54869 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Hmgcs2P54869 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmgcs2P54869 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Hmgcs2P54869 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.13■■□□□ 1.13
Hmgcs2P54869 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmgcs2P54869 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmgcs2P54869 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs2P54869 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms