Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nub1P54729 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Nub1P54729 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nub1P54729 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Nub1P54729 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nub1P54729 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nub1P54729 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nub1P54729 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nub1P54729 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nub1P54729 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.29■■□□□ 1
Nub1P54729 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.29■■□□□ 1
Nub1P54729 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.29■■□□□ 1
Nub1P54729 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
Nub1P54729 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nub1P54729 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nub1P54729 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nub1P54729 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nub1P54729 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nub1P54729 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.28■■□□□ 1
Nub1P54729 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.28■■□□□ 1
Nub1P54729 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Nub1P54729 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Nub1P54729 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nub1P54729 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nub1P54729 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nub1P54729 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nub1P54729 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nub1P54729 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nub1P54729 Gm43137-201ENSMUST00000198052 594 ntBASIC21.27■■□□□ 1
Nub1P54729 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nub1P54729 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nub1P54729 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nub1P54729 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Nub1P54729 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nub1P54729 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nub1P54729 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nub1P54729 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nub1P54729 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nub1P54729 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Nub1P54729 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nub1P54729 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nub1P54729 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.25■□□□□ 0.99
Nub1P54729 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Nub1P54729 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nub1P54729 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nub1P54729 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Nub1P54729 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.25■□□□□ 0.99
Nub1P54729 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nub1P54729 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nub1P54729 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Nub1P54729 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nub1P54729 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nub1P54729 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nub1P54729 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nub1P54729 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.24■□□□□ 0.99
Nub1P54729 Gm27454-201ENSMUST00000185090 204 ntBASIC21.24■□□□□ 0.99
Nub1P54729 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nub1P54729 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.24■□□□□ 0.99
Nub1P54729 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nub1P54729 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nub1P54729 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nub1P54729 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.24■□□□□ 0.99
Nub1P54729 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nub1P54729 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Nub1P54729 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.23■□□□□ 0.99
Nub1P54729 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nub1P54729 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.23■□□□□ 0.99
Nub1P54729 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nub1P54729 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nub1P54729 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.22■□□□□ 0.99
Nub1P54729 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Nub1P54729 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Nub1P54729 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Nub1P54729 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.22■□□□□ 0.99
Nub1P54729 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Nub1P54729 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nub1P54729 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.22■□□□□ 0.99
Nub1P54729 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Nub1P54729 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nub1P54729 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nub1P54729 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Nub1P54729 Gm12821-201ENSMUST00000120022 600 ntBASIC21.21■□□□□ 0.99
Nub1P54729 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nub1P54729 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nub1P54729 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nub1P54729 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nub1P54729 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.21■□□□□ 0.99
Nub1P54729 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nub1P54729 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nub1P54729 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Nub1P54729 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Nub1P54729 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms