Protein–RNA interactions for Protein: P51791

Clcn3, H(+)/Cl(-) exchange transporter 3, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3P51791 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn3P51791 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn3P51791 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn3P51791 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn3P51791 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Clcn3P51791 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn3P51791 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.63■■□□□ 1.05
Clcn3P51791 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.63■■□□□ 1.05
Clcn3P51791 Gm42642-201ENSMUST00000200683 355 ntBASIC21.63■■□□□ 1.05
Clcn3P51791 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.63■■□□□ 1.05
Clcn3P51791 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn3P51791 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.63■■□□□ 1.05
Clcn3P51791 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Clcn3P51791 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn3P51791 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn3P51791 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn3P51791 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.63■■□□□ 1.05
Clcn3P51791 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.62■■□□□ 1.05
Clcn3P51791 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn3P51791 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn3P51791 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.62■■□□□ 1.05
Clcn3P51791 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn3P51791 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn3P51791 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn3P51791 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn3P51791 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn3P51791 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Clcn3P51791 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.61■■□□□ 1.05
Clcn3P51791 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn3P51791 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Clcn3P51791 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.61■■□□□ 1.05
Clcn3P51791 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn3P51791 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
Clcn3P51791 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Clcn3P51791 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.61■■□□□ 1.05
Clcn3P51791 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn3P51791 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn3P51791 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn3P51791 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn3P51791 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn3P51791 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.6■■□□□ 1.05
Clcn3P51791 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn3P51791 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn3P51791 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Clcn3P51791 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn3P51791 Gm42569-201ENSMUST00000200539 472 ntBASIC21.6■■□□□ 1.05
Clcn3P51791 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Clcn3P51791 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.6■■□□□ 1.05
Clcn3P51791 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Clcn3P51791 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn3P51791 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn3P51791 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Clcn3P51791 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn3P51791 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn3P51791 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn3P51791 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.59■■□□□ 1.05
Clcn3P51791 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn3P51791 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn3P51791 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn3P51791 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn3P51791 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn3P51791 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clcn3P51791 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Clcn3P51791 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Clcn3P51791 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clcn3P51791 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Clcn3P51791 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Clcn3P51791 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Clcn3P51791 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clcn3P51791 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clcn3P51791 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.57■■□□□ 1.04
Clcn3P51791 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Clcn3P51791 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Clcn3P51791 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn3P51791 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Clcn3P51791 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clcn3P51791 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Clcn3P51791 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.55■■□□□ 1.04
Clcn3P51791 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.55■■□□□ 1.04
Clcn3P51791 Gm7291-201ENSMUST00000199147 382 ntBASIC21.55■■□□□ 1.04
Clcn3P51791 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clcn3P51791 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Clcn3P51791 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clcn3P51791 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Clcn3P51791 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn3P51791 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.54■■□□□ 1.04
Clcn3P51791 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn3P51791 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn3P51791 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn3P51791 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn3P51791 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms