Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr1P51675 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr1P51675 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr1P51675 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ccr1P51675 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ccr1P51675 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccr1P51675 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccr1P51675 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr1P51675 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr1P51675 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccr1P51675 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr1P51675 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr1P51675 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccr1P51675 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccr1P51675 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccr1P51675 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ccr1P51675 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.65■■□□□ 1.06
Ccr1P51675 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccr1P51675 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ccr1P51675 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ccr1P51675 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ccr1P51675 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccr1P51675 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccr1P51675 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.64■■□□□ 1.05
Ccr1P51675 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ccr1P51675 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccr1P51675 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Ccr1P51675 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccr1P51675 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1P51675 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ccr1P51675 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1P51675 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.63■■□□□ 1.05
Ccr1P51675 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccr1P51675 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1P51675 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1P51675 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1P51675 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1P51675 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1P51675 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.63■■□□□ 1.05
Ccr1P51675 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr1P51675 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.62■■□□□ 1.05
Ccr1P51675 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccr1P51675 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccr1P51675 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.62■■□□□ 1.05
Ccr1P51675 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccr1P51675 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ccr1P51675 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Ccr1P51675 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccr1P51675 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr1P51675 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ccr1P51675 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr1P51675 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccr1P51675 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr1P51675 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr1P51675 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr1P51675 Gm42569-201ENSMUST00000200539 472 ntBASIC21.61■■□□□ 1.05
Ccr1P51675 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr1P51675 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr1P51675 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1P51675 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1P51675 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1P51675 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
Ccr1P51675 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1P51675 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1P51675 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1P51675 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1P51675 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr1P51675 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccr1P51675 Gm10849-201ENSMUST00000100397 618 ntBASIC21.59■■□□□ 1.05
Ccr1P51675 Gm7291-201ENSMUST00000199147 382 ntBASIC21.59■■□□□ 1.05
Ccr1P51675 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccr1P51675 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr1P51675 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.58■■□□□ 1.05
Ccr1P51675 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Ccr1P51675 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr1P51675 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr1P51675 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.58■■□□□ 1.05
Ccr1P51675 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr1P51675 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr1P51675 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr1P51675 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.58■■□□□ 1.04
Ccr1P51675 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr1P51675 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr1P51675 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr1P51675 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr1P51675 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.57■■□□□ 1.04
Ccr1P51675 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.57■■□□□ 1.04
Ccr1P51675 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr1P51675 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr1P51675 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1P51675 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1P51675 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1P51675 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1P51675 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1P51675 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1P51675 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1P51675 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.56■■□□□ 1.04
Ccr1P51675 Gm42778-201ENSMUST00000199644 553 ntBASIC21.56■■□□□ 1.04
Ccr1P51675 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr1P51675 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms