Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TgfaP48030 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TgfaP48030 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TgfaP48030 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TgfaP48030 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TgfaP48030 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TgfaP48030 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TgfaP48030 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TgfaP48030 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TgfaP48030 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
TgfaP48030 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TgfaP48030 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TgfaP48030 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.27■□□□□ 0.35
TgfaP48030 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TgfaP48030 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TgfaP48030 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TgfaP48030 Gm10653-202ENSMUST00000139570 835 ntBASIC17.26■□□□□ 0.35
TgfaP48030 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.26■□□□□ 0.35
TgfaP48030 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.26■□□□□ 0.35
TgfaP48030 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.26■□□□□ 0.35
TgfaP48030 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TgfaP48030 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TgfaP48030 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.26■□□□□ 0.35
TgfaP48030 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TgfaP48030 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TgfaP48030 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TgfaP48030 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TgfaP48030 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TgfaP48030 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TgfaP48030 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TgfaP48030 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.25■□□□□ 0.35
TgfaP48030 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.25■□□□□ 0.35
TgfaP48030 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TgfaP48030 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.24■□□□□ 0.35
TgfaP48030 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TgfaP48030 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TgfaP48030 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TgfaP48030 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TgfaP48030 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TgfaP48030 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TgfaP48030 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TgfaP48030 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.23■□□□□ 0.35
TgfaP48030 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TgfaP48030 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TgfaP48030 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TgfaP48030 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TgfaP48030 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TgfaP48030 Gm22240-201ENSMUST00000175225 82 ntBASIC17.23■□□□□ 0.35
TgfaP48030 Gm20760-201ENSMUST00000179197 648 ntBASIC17.23■□□□□ 0.35
TgfaP48030 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.23■□□□□ 0.35
TgfaP48030 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TgfaP48030 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TgfaP48030 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TgfaP48030 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TgfaP48030 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TgfaP48030 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.22■□□□□ 0.35
TgfaP48030 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.22■□□□□ 0.35
TgfaP48030 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.22■□□□□ 0.35
TgfaP48030 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Gm4968-201ENSMUST00000071458 858 ntBASIC17.22■□□□□ 0.35
TgfaP48030 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TgfaP48030 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TgfaP48030 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TgfaP48030 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TgfaP48030 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TgfaP48030 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TgfaP48030 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TgfaP48030 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TgfaP48030 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TgfaP48030 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.21■□□□□ 0.35
TgfaP48030 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TgfaP48030 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TgfaP48030 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TgfaP48030 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.2■□□□□ 0.34
TgfaP48030 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TgfaP48030 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TgfaP48030 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TgfaP48030 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.2■□□□□ 0.34
TgfaP48030 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TgfaP48030 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TgfaP48030 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TgfaP48030 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms