Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Xcl1P47993 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xcl1P47993 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xcl1P47993 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xcl1P47993 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xcl1P47993 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Xcl1P47993 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.01□□□□□ -0.33
Xcl1P47993 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xcl1P47993 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xcl1P47993 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13□□□□□ -0.33
Xcl1P47993 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Xcl1P47993 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Xcl1P47993 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13□□□□□ -0.33
Xcl1P47993 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13□□□□□ -0.33
Xcl1P47993 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Xcl1P47993 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Xcl1P47993 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Xcl1P47993 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xcl1P47993 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Xcl1P47993 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Xcl1P47993 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Xcl1P47993 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Xcl1P47993 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Xcl1P47993 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Xcl1P47993 Gm7199-201ENSMUST00000118327 1485 ntBASIC12.97□□□□□ -0.33
Xcl1P47993 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Xcl1P47993 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Xcl1P47993 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Gm37136-201ENSMUST00000194368 194 ntBASIC12.97□□□□□ -0.33
Xcl1P47993 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Xcl1P47993 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.97□□□□□ -0.33
Xcl1P47993 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Xcl1P47993 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.97□□□□□ -0.33
Xcl1P47993 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Xcl1P47993 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC12.97□□□□□ -0.33
Xcl1P47993 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Rarb-207ENSMUST00000225921 2756 ntBASIC12.97□□□□□ -0.33
Xcl1P47993 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Xcl1P47993 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC12.96□□□□□ -0.33
Xcl1P47993 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Xcl1P47993 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.96□□□□□ -0.33
Xcl1P47993 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms