Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rph3aP47708 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rph3aP47708 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rph3aP47708 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rph3aP47708 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Rph3aP47708 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rph3aP47708 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rph3aP47708 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rph3aP47708 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rph3aP47708 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.03■□□□□ 0.64
Rph3aP47708 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rph3aP47708 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rph3aP47708 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rph3aP47708 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rph3aP47708 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rph3aP47708 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rph3aP47708 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rph3aP47708 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rph3aP47708 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rph3aP47708 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rph3aP47708 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.02■□□□□ 0.64
Rph3aP47708 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.02■□□□□ 0.64
Rph3aP47708 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rph3aP47708 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.02■□□□□ 0.64
Rph3aP47708 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rph3aP47708 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rph3aP47708 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rph3aP47708 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rph3aP47708 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rph3aP47708 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rph3aP47708 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rph3aP47708 Gm21956-201ENSMUST00000179946 522 ntBASIC19.01■□□□□ 0.63
Rph3aP47708 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.01■□□□□ 0.63
Rph3aP47708 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rph3aP47708 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rph3aP47708 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.01■□□□□ 0.63
Rph3aP47708 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rph3aP47708 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rph3aP47708 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rph3aP47708 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rph3aP47708 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rph3aP47708 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19■□□□□ 0.63
Rph3aP47708 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rph3aP47708 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19■□□□□ 0.63
Rph3aP47708 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rph3aP47708 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rph3aP47708 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rph3aP47708 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rph3aP47708 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rph3aP47708 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rph3aP47708 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rph3aP47708 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rph3aP47708 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rph3aP47708 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.98■□□□□ 0.63
Rph3aP47708 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Rph3aP47708 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rph3aP47708 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rph3aP47708 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.98■□□□□ 0.63
Rph3aP47708 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Rph3aP47708 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.97■□□□□ 0.63
Rph3aP47708 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.97■□□□□ 0.63
Rph3aP47708 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Rph3aP47708 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rph3aP47708 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rph3aP47708 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.96■□□□□ 0.63
Rph3aP47708 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rph3aP47708 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rph3aP47708 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Rph3aP47708 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
Rph3aP47708 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms