Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps4bP46467 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps4bP46467 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps4bP46467 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps4bP46467 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.06■□□□□ 0.8
Vps4bP46467 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps4bP46467 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps4bP46467 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps4bP46467 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps4bP46467 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps4bP46467 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vps4bP46467 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps4bP46467 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Vps4bP46467 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.05■□□□□ 0.8
Vps4bP46467 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vps4bP46467 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps4bP46467 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.04■□□□□ 0.8
Vps4bP46467 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps4bP46467 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps4bP46467 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps4bP46467 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Vps4bP46467 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.04■□□□□ 0.8
Vps4bP46467 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.04■□□□□ 0.8
Vps4bP46467 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps4bP46467 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps4bP46467 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps4bP46467 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps4bP46467 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps4bP46467 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps4bP46467 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps4bP46467 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps4bP46467 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps4bP46467 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Vps4bP46467 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps4bP46467 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps4bP46467 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Vps4bP46467 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps4bP46467 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Vps4bP46467 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Vps4bP46467 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.02■□□□□ 0.8
Vps4bP46467 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vps4bP46467 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vps4bP46467 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Vps4bP46467 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Vps4bP46467 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps4bP46467 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps4bP46467 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps4bP46467 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps4bP46467 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Vps4bP46467 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps4bP46467 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps4bP46467 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps4bP46467 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps4bP46467 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vps4bP46467 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vps4bP46467 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vps4bP46467 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20■□□□□ 0.79
Vps4bP46467 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20■□□□□ 0.79
Vps4bP46467 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20■□□□□ 0.79
Vps4bP46467 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vps4bP46467 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.99■□□□□ 0.79
Vps4bP46467 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Vps4bP46467 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps4bP46467 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Vps4bP46467 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps4bP46467 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps4bP46467 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.99■□□□□ 0.79
Vps4bP46467 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Vps4bP46467 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps4bP46467 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps4bP46467 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps4bP46467 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.99■□□□□ 0.79
Vps4bP46467 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps4bP46467 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vps4bP46467 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vps4bP46467 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Vps4bP46467 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps4bP46467 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Vps4bP46467 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps4bP46467 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps4bP46467 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Vps4bP46467 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Vps4bP46467 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps4bP46467 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps4bP46467 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps4bP46467 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps4bP46467 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps4bP46467 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps4bP46467 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Vps4bP46467 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps4bP46467 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.96■□□□□ 0.79
Vps4bP46467 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms