Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn1aP39689 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Gm8495-201ENSMUST00000188740 694 ntBASIC16.37■□□□□ 0.21
Cdkn1aP39689 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Cdkn1aP39689 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cdkn1aP39689 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkn1aP39689 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkn1aP39689 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkn1aP39689 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Gm11421-201ENSMUST00000122124 294 ntBASIC16.35■□□□□ 0.21
Cdkn1aP39689 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdkn1aP39689 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdkn1aP39689 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.34■□□□□ 0.21
Cdkn1aP39689 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.34■□□□□ 0.21
Cdkn1aP39689 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.34■□□□□ 0.21
Cdkn1aP39689 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Cdkn1aP39689 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkn1aP39689 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdkn1aP39689 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkn1aP39689 Gm5874-201ENSMUST00000096101 508 ntBASIC16.33■□□□□ 0.2
Cdkn1aP39689 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.33■□□□□ 0.2
Cdkn1aP39689 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cdkn1aP39689 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkn1aP39689 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkn1aP39689 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkn1aP39689 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkn1aP39689 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkn1aP39689 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.31■□□□□ 0.2
Cdkn1aP39689 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkn1aP39689 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdkn1aP39689 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms