Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Sox5P35710 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox5P35710 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox5P35710 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox5P35710 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox5P35710 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Sox5P35710 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sox5P35710 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Sox5P35710 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox5P35710 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox5P35710 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox5P35710 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox5P35710 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sox5P35710 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.67■■□□□ 1.06
Sox5P35710 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sox5P35710 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.66■■□□□ 1.06
Sox5P35710 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.66■■□□□ 1.06
Sox5P35710 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox5P35710 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sox5P35710 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox5P35710 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Sox5P35710 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox5P35710 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Sox5P35710 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Sox5P35710 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.65■■□□□ 1.06
Sox5P35710 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox5P35710 Mir6236-201ENSMUST00000184437 123 ntBASIC21.65■■□□□ 1.06
Sox5P35710 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.65■■□□□ 1.06
Sox5P35710 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Sox5P35710 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox5P35710 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox5P35710 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.65■■□□□ 1.06
Sox5P35710 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.65■■□□□ 1.06
Sox5P35710 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox5P35710 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox5P35710 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox5P35710 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.64■■□□□ 1.06
Sox5P35710 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sox5P35710 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sox5P35710 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sox5P35710 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sox5P35710 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox5P35710 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox5P35710 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox5P35710 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox5P35710 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox5P35710 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sox5P35710 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sox5P35710 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox5P35710 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Sox5P35710 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox5P35710 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox5P35710 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox5P35710 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox5P35710 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox5P35710 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox5P35710 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Sox5P35710 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox5P35710 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox5P35710 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox5P35710 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sox5P35710 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sox5P35710 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox5P35710 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Sox5P35710 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox5P35710 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox5P35710 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sox5P35710 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
Sox5P35710 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sox5P35710 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sox5P35710 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sox5P35710 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox5P35710 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.61■■□□□ 1.05
Sox5P35710 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.61■■□□□ 1.05
Sox5P35710 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox5P35710 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox5P35710 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Sox5P35710 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox5P35710 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sox5P35710 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sox5P35710 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.6■■□□□ 1.05
Sox5P35710 Gm43530-201ENSMUST00000195920 274 ntBASIC21.6■■□□□ 1.05
Sox5P35710 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox5P35710 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox5P35710 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox5P35710 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Sox5P35710 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sox5P35710 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.59■■□□□ 1.05
Sox5P35710 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.59■■□□□ 1.05
Sox5P35710 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Sox5P35710 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sox5P35710 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox5P35710 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox5P35710 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.58■■□□□ 1.05
Sox5P35710 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.58■■□□□ 1.05
Sox5P35710 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sox5P35710 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sox5P35710 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox5P35710 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox5P35710 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms