Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a11P31650 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a11P31650 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a11P31650 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a11P31650 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.78■□□□□ 0.6
Slc6a11P31650 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a11P31650 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a11P31650 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Slc6a11P31650 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a11P31650 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a11P31650 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a11P31650 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a11P31650 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Slc6a11P31650 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a11P31650 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc6a11P31650 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc6a11P31650 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc6a11P31650 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a11P31650 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a11P31650 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a11P31650 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.76■□□□□ 0.59
Slc6a11P31650 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.76■□□□□ 0.59
Slc6a11P31650 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a11P31650 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a11P31650 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a11P31650 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.75■□□□□ 0.59
Slc6a11P31650 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slc6a11P31650 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a11P31650 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a11P31650 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Slc6a11P31650 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a11P31650 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a11P31650 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.74■□□□□ 0.59
Slc6a11P31650 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a11P31650 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Slc6a11P31650 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a11P31650 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc6a11P31650 Gm10399-202ENSMUST00000202768 748 ntBASIC18.74■□□□□ 0.59
Slc6a11P31650 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a11P31650 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Slc6a11P31650 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Slc6a11P31650 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a11P31650 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc6a11P31650 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a11P31650 Gm27454-201ENSMUST00000185090 204 ntBASIC18.73■□□□□ 0.59
Slc6a11P31650 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a11P31650 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a11P31650 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a11P31650 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Slc6a11P31650 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a11P31650 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc6a11P31650 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Slc6a11P31650 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.72■□□□□ 0.59
Slc6a11P31650 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.72■□□□□ 0.59
Slc6a11P31650 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a11P31650 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a11P31650 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a11P31650 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc6a11P31650 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc6a11P31650 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slc6a11P31650 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a11P31650 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a11P31650 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.71■□□□□ 0.59
Slc6a11P31650 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Slc6a11P31650 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a11P31650 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a11P31650 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Slc6a11P31650 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a11P31650 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.7■□□□□ 0.58
Slc6a11P31650 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc6a11P31650 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a11P31650 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a11P31650 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a11P31650 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc6a11P31650 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a11P31650 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a11P31650 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc6a11P31650 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.69■□□□□ 0.58
Slc6a11P31650 Gm45417-201ENSMUST00000209533 758 ntBASIC18.69■□□□□ 0.58
Slc6a11P31650 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a11P31650 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc6a11P31650 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc6a11P31650 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms