Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Nckap1P28660 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Gm7291-201ENSMUST00000199147 382 ntBASIC19.73■□□□□ 0.75
Nckap1P28660 Gm42778-201ENSMUST00000199644 553 ntBASIC19.73■□□□□ 0.75
Nckap1P28660 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.73■□□□□ 0.75
Nckap1P28660 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nckap1P28660 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nckap1P28660 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nckap1P28660 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nckap1P28660 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nckap1P28660 Gm18671-201ENSMUST00000214826 683 ntBASIC19.72■□□□□ 0.75
Nckap1P28660 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nckap1P28660 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nckap1P28660 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nckap1P28660 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nckap1P28660 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nckap1P28660 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nckap1P28660 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nckap1P28660 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nckap1P28660 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nckap1P28660 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.71■□□□□ 0.75
Nckap1P28660 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nckap1P28660 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nckap1P28660 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nckap1P28660 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nckap1P28660 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nckap1P28660 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nckap1P28660 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nckap1P28660 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.7■□□□□ 0.74
Nckap1P28660 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nckap1P28660 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.7■□□□□ 0.74
Nckap1P28660 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nckap1P28660 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nckap1P28660 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nckap1P28660 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nckap1P28660 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.69■□□□□ 0.74
Nckap1P28660 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.69■□□□□ 0.74
Nckap1P28660 Gm27405-201ENSMUST00000184201 112 ntBASIC19.69■□□□□ 0.74
Nckap1P28660 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nckap1P28660 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nckap1P28660 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nckap1P28660 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nckap1P28660 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nckap1P28660 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.69■□□□□ 0.74
Nckap1P28660 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nckap1P28660 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Nckap1P28660 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nckap1P28660 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nckap1P28660 Gm26571-201ENSMUST00000181399 666 ntBASIC19.68■□□□□ 0.74
Nckap1P28660 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.68■□□□□ 0.74
Nckap1P28660 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.68■□□□□ 0.74
Nckap1P28660 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nckap1P28660 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nckap1P28660 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nckap1P28660 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nckap1P28660 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nckap1P28660 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nckap1P28660 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nckap1P28660 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nckap1P28660 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nckap1P28660 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nckap1P28660 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nckap1P28660 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nckap1P28660 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nckap1P28660 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nckap1P28660 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.66■□□□□ 0.74
Nckap1P28660 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nckap1P28660 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nckap1P28660 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nckap1P28660 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nckap1P28660 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nckap1P28660 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nckap1P28660 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nckap1P28660 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Nckap1P28660 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nckap1P28660 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.65■□□□□ 0.74
Nckap1P28660 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nckap1P28660 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nckap1P28660 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nckap1P28660 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nckap1P28660 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.65■□□□□ 0.74
Nckap1P28660 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.65■□□□□ 0.74
Nckap1P28660 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nckap1P28660 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nckap1P28660 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nckap1P28660 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.74
Nckap1P28660 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nckap1P28660 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Nckap1P28660 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nckap1P28660 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nckap1P28660 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nckap1P28660 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nckap1P28660 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms