Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BrafP28028 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BrafP28028 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BrafP28028 Gm45102-201ENSMUST00000207427 857 ntBASIC19.25■□□□□ 0.67
BrafP28028 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BrafP28028 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BrafP28028 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
BrafP28028 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BrafP28028 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.24■□□□□ 0.67
BrafP28028 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BrafP28028 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BrafP28028 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BrafP28028 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BrafP28028 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
BrafP28028 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BrafP28028 Gm14117-201ENSMUST00000122417 843 ntBASIC19.23■□□□□ 0.67
BrafP28028 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BrafP28028 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BrafP28028 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.23■□□□□ 0.67
BrafP28028 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BrafP28028 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
BrafP28028 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BrafP28028 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BrafP28028 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BrafP28028 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BrafP28028 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BrafP28028 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BrafP28028 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.22■□□□□ 0.67
BrafP28028 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.22■□□□□ 0.67
BrafP28028 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BrafP28028 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
BrafP28028 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.21■□□□□ 0.67
BrafP28028 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.21■□□□□ 0.67
BrafP28028 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.21■□□□□ 0.67
BrafP28028 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
BrafP28028 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BrafP28028 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BrafP28028 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BrafP28028 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BrafP28028 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BrafP28028 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BrafP28028 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BrafP28028 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BrafP28028 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BrafP28028 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
BrafP28028 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
BrafP28028 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.19■□□□□ 0.66
BrafP28028 Gm9870-201ENSMUST00000063874 645 ntBASIC19.19■□□□□ 0.66
BrafP28028 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BrafP28028 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.18■□□□□ 0.66
BrafP28028 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Gm22238-201ENSMUST00000175222 88 ntBASIC19.18■□□□□ 0.66
BrafP28028 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
BrafP28028 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BrafP28028 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BrafP28028 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BrafP28028 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BrafP28028 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.17■□□□□ 0.66
BrafP28028 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BrafP28028 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.17■□□□□ 0.66
BrafP28028 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BrafP28028 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
BrafP28028 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
BrafP28028 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BrafP28028 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms