Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm15820-201ENSMUST00000201566 728 ntBASIC18.93■□□□□ 0.62
BdnfP21237 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.93■□□□□ 0.62
BdnfP21237 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BdnfP21237 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BdnfP21237 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
BdnfP21237 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BdnfP21237 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BdnfP21237 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
BdnfP21237 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BdnfP21237 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BdnfP21237 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.92■□□□□ 0.62
BdnfP21237 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.92■□□□□ 0.62
BdnfP21237 Gm40881-201ENSMUST00000223397 166 ntBASIC18.92■□□□□ 0.62
BdnfP21237 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BdnfP21237 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BdnfP21237 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BdnfP21237 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
BdnfP21237 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
BdnfP21237 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
BdnfP21237 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BdnfP21237 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.9■□□□□ 0.62
BdnfP21237 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.9■□□□□ 0.62
BdnfP21237 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BdnfP21237 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BdnfP21237 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.89■□□□□ 0.61
BdnfP21237 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.89■□□□□ 0.61
BdnfP21237 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BdnfP21237 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
BdnfP21237 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.88■□□□□ 0.61
BdnfP21237 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.88■□□□□ 0.61
BdnfP21237 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
BdnfP21237 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BdnfP21237 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BdnfP21237 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BdnfP21237 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BdnfP21237 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BdnfP21237 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BdnfP21237 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.87■□□□□ 0.61
BdnfP21237 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BdnfP21237 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BdnfP21237 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BdnfP21237 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.87■□□□□ 0.61
BdnfP21237 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
BdnfP21237 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BdnfP21237 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BdnfP21237 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.86■□□□□ 0.61
BdnfP21237 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.86■□□□□ 0.61
BdnfP21237 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BdnfP21237 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.86■□□□□ 0.61
BdnfP21237 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BdnfP21237 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BdnfP21237 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.86■□□□□ 0.61
BdnfP21237 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BdnfP21237 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
BdnfP21237 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms