Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fv4P11370 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Fv4P11370 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fv4P11370 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fv4P11370 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Fv4P11370 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 Etf1-202ENSMUST00000180351 108 ntBASIC19.19■□□□□ 0.66
Fv4P11370 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Fv4P11370 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.19■□□□□ 0.66
Fv4P11370 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fv4P11370 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Fv4P11370 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.18■□□□□ 0.66
Fv4P11370 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Fv4P11370 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fv4P11370 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fv4P11370 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fv4P11370 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Fv4P11370 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fv4P11370 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Fv4P11370 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fv4P11370 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Fv4P11370 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fv4P11370 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Fv4P11370 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fv4P11370 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Fv4P11370 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fv4P11370 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fv4P11370 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Fv4P11370 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Fv4P11370 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Fv4P11370 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fv4P11370 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.16■□□□□ 0.66
Fv4P11370 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fv4P11370 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
Fv4P11370 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Fv4P11370 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fv4P11370 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.16■□□□□ 0.66
Fv4P11370 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.16■□□□□ 0.66
Fv4P11370 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fv4P11370 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fv4P11370 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fv4P11370 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fv4P11370 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fv4P11370 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Fv4P11370 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.15■□□□□ 0.66
Fv4P11370 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fv4P11370 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fv4P11370 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.15■□□□□ 0.66
Fv4P11370 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.15■□□□□ 0.66
Fv4P11370 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.15■□□□□ 0.66
Fv4P11370 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fv4P11370 Iqck-206ENSMUST00000208658 2891 ntBASIC19.15■□□□□ 0.66
Fv4P11370 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fv4P11370 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fv4P11370 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Fv4P11370 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Fv4P11370 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fv4P11370 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fv4P11370 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.14■□□□□ 0.65
Fv4P11370 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Fv4P11370 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fv4P11370 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
Fv4P11370 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fv4P11370 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fv4P11370 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Fv4P11370 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fv4P11370 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fv4P11370 Gm9959-201ENSMUST00000068277 390 ntBASIC19.13■□□□□ 0.65
Fv4P11370 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.13■□□□□ 0.65
Fv4P11370 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fv4P11370 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fv4P11370 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fv4P11370 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fv4P11370 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fv4P11370 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fv4P11370 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fv4P11370 Gm22238-201ENSMUST00000175222 88 ntBASIC19.12■□□□□ 0.65
Fv4P11370 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Fv4P11370 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fv4P11370 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Fv4P11370 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.11■□□□□ 0.65
Fv4P11370 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fv4P11370 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.11■□□□□ 0.65
Fv4P11370 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Fv4P11370 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Fv4P11370 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Fv4P11370 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fv4P11370 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fv4P11370 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.1■□□□□ 0.65
Fv4P11370 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fv4P11370 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.1■□□□□ 0.65
Fv4P11370 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Fv4P11370 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms