Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.54■□□□□ 0.08
Fn1P11276 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.54■□□□□ 0.08
Fn1P11276 Gm21362-201ENSMUST00000194272 928 ntBASIC15.54■□□□□ 0.08
Fn1P11276 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Fn1P11276 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.54■□□□□ 0.08
Fn1P11276 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fn1P11276 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Fn1P11276 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.53■□□□□ 0.08
Fn1P11276 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Fn1P11276 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Fn1P11276 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fn1P11276 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fn1P11276 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Fn1P11276 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Fn1P11276 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Fn1P11276 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.52■□□□□ 0.08
Fn1P11276 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.52■□□□□ 0.08
Fn1P11276 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fn1P11276 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Fn1P11276 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Fn1P11276 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Fn1P11276 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Fn1P11276 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.51■□□□□ 0.07
Fn1P11276 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.51■□□□□ 0.07
Fn1P11276 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fn1P11276 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fn1P11276 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fn1P11276 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fn1P11276 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.5■□□□□ 0.07
Fn1P11276 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.5■□□□□ 0.07
Fn1P11276 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.5■□□□□ 0.07
Fn1P11276 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fn1P11276 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fn1P11276 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fn1P11276 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fn1P11276 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fn1P11276 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.49■□□□□ 0.07
Fn1P11276 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.49■□□□□ 0.07
Fn1P11276 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.49■□□□□ 0.07
Fn1P11276 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.49■□□□□ 0.07
Fn1P11276 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fn1P11276 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Fn1P11276 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.49■□□□□ 0.07
Fn1P11276 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fn1P11276 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fn1P11276 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fn1P11276 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.48■□□□□ 0.07
Fn1P11276 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.48■□□□□ 0.07
Fn1P11276 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.48■□□□□ 0.07
Fn1P11276 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.48■□□□□ 0.07
Fn1P11276 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.48■□□□□ 0.07
Fn1P11276 Gm13534-201ENSMUST00000121169 513 ntBASIC15.48■□□□□ 0.07
Fn1P11276 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fn1P11276 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Fn1P11276 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fn1P11276 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Fn1P11276 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.46■□□□□ 0.07
Fn1P11276 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Fn1P11276 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Fn1P11276 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Fn1P11276 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Fn1P11276 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Fn1P11276 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Fn1P11276 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Fn1P11276 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Fn1P11276 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Fn1P11276 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fn1P11276 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fn1P11276 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.45■□□□□ 0.06
Fn1P11276 Gm10231-201ENSMUST00000181584 441 ntBASIC15.45■□□□□ 0.06
Fn1P11276 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fn1P11276 Gm10175-202ENSMUST00000208752 441 ntBASIC15.45■□□□□ 0.06
Fn1P11276 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.45■□□□□ 0.06
Fn1P11276 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fn1P11276 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fn1P11276 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Fn1P11276 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Fn1P11276 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms