Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
P04214 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
P04214 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
P04214 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.05■□□□□ 0.96
P04214 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.04■□□□□ 0.96
P04214 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04214 Gm13146-201ENSMUST00000118508 780 ntBASIC21.04■□□□□ 0.96
P04214 Gm13148-201ENSMUST00000118892 745 ntBASIC21.04■□□□□ 0.96
P04214 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.04■□□□□ 0.96
P04214 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.04■□□□□ 0.96
P04214 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.04■□□□□ 0.96
P04214 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P04214 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04214 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04214 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04214 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04214 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04214 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
P04214 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.03■□□□□ 0.96
P04214 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
P04214 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
P04214 Gm10252-201ENSMUST00000209541 832 ntBASIC21.03■□□□□ 0.96
P04214 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04214 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P04214 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04214 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04214 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04214 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P04214 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.02■□□□□ 0.96
P04214 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P04214 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04214 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04214 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04214 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P04214 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.01■□□□□ 0.95
P04214 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P04214 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P04214 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.01■□□□□ 0.95
P04214 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.01■□□□□ 0.95
P04214 Gm8520-201ENSMUST00000186517 868 ntBASIC21.01■□□□□ 0.95
P04214 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.01■□□□□ 0.95
P04214 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04214 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04214 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.01■□□□□ 0.95
P04214 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21■□□□□ 0.95
P04214 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21■□□□□ 0.95
P04214 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21■□□□□ 0.95
P04214 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04214 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04214 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04214 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04214 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.99■□□□□ 0.95
P04214 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04214 Gm7290-201ENSMUST00000104990 617 ntBASIC20.99■□□□□ 0.95
P04214 Gm12918-201ENSMUST00000120234 636 ntBASIC20.99■□□□□ 0.95
P04214 Gm15710-201ENSMUST00000121821 636 ntBASIC20.99■□□□□ 0.95
P04214 Gm5075-201ENSMUST00000196916 622 ntBASIC20.99■□□□□ 0.95
P04214 Gm6365-201ENSMUST00000054711 744 ntBASIC20.99■□□□□ 0.95
P04214 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.99■□□□□ 0.95
P04214 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.99■□□□□ 0.95
P04214 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04214 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04214 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
P04214 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04214 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
P04214 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04214 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.98■□□□□ 0.95
P04214 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.98■□□□□ 0.95
P04214 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04214 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04214 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.97■□□□□ 0.95
P04214 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.97■□□□□ 0.95
P04214 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04214 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04214 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.96■□□□□ 0.95
P04214 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
P04214 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
P04214 Gm5408-201ENSMUST00000197998 747 ntBASIC20.96■□□□□ 0.95
P04214 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
P04214 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.96■□□□□ 0.95
P04214 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04214 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.96■□□□□ 0.95
P04214 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04214 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04214 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
P04214 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04214 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04214 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04214 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04214 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04214 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04214 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms