Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CopeO89079 Gm7143-201ENSMUST00000222811 859 ntBASIC20.44■□□□□ 0.86
CopeO89079 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CopeO89079 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CopeO89079 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CopeO89079 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CopeO89079 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CopeO89079 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CopeO89079 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.44■□□□□ 0.86
CopeO89079 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CopeO89079 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CopeO89079 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CopeO89079 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CopeO89079 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.43■□□□□ 0.86
CopeO89079 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CopeO89079 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CopeO89079 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CopeO89079 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CopeO89079 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CopeO89079 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CopeO89079 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.42■□□□□ 0.86
CopeO89079 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CopeO89079 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CopeO89079 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CopeO89079 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CopeO89079 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CopeO89079 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CopeO89079 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CopeO89079 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.41■□□□□ 0.86
CopeO89079 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.41■□□□□ 0.86
CopeO89079 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.41■□□□□ 0.86
CopeO89079 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CopeO89079 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CopeO89079 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CopeO89079 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CopeO89079 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CopeO89079 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CopeO89079 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CopeO89079 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.4■□□□□ 0.86
CopeO89079 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CopeO89079 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.4■□□□□ 0.86
CopeO89079 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CopeO89079 Gm5921-201ENSMUST00000075898 882 ntBASIC20.4■□□□□ 0.86
CopeO89079 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.4■□□□□ 0.86
CopeO89079 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CopeO89079 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CopeO89079 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.39■□□□□ 0.86
CopeO89079 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CopeO89079 Cap2-205ENSMUST00000225824 1634 ntBASIC20.39■□□□□ 0.86
CopeO89079 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CopeO89079 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.39■□□□□ 0.85
CopeO89079 Gm10232-201ENSMUST00000089221 720 ntBASIC20.39■□□□□ 0.85
CopeO89079 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CopeO89079 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CopeO89079 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.38■□□□□ 0.85
CopeO89079 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CopeO89079 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CopeO89079 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CopeO89079 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.37■□□□□ 0.85
CopeO89079 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CopeO89079 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CopeO89079 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CopeO89079 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CopeO89079 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CopeO89079 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CopeO89079 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CopeO89079 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CopeO89079 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CopeO89079 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CopeO89079 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CopeO89079 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CopeO89079 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CopeO89079 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CopeO89079 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CopeO89079 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
CopeO89079 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CopeO89079 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CopeO89079 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CopeO89079 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.35■□□□□ 0.85
CopeO89079 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CopeO89079 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CopeO89079 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CopeO89079 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CopeO89079 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CopeO89079 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CopeO89079 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CopeO89079 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CopeO89079 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CopeO89079 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CopeO89079 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CopeO89079 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CopeO89079 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms