Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Matn4O89029 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Matn4O89029 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.76■□□□□ 0.59
Matn4O89029 Gm40881-201ENSMUST00000223397 166 ntBASIC18.76■□□□□ 0.59
Matn4O89029 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Matn4O89029 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn4O89029 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.76■□□□□ 0.59
Matn4O89029 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Matn4O89029 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.75■□□□□ 0.59
Matn4O89029 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Matn4O89029 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Matn4O89029 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Matn4O89029 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Matn4O89029 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.74■□□□□ 0.59
Matn4O89029 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.74■□□□□ 0.59
Matn4O89029 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Matn4O89029 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Matn4O89029 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Matn4O89029 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.73■□□□□ 0.59
Matn4O89029 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Matn4O89029 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Matn4O89029 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn4O89029 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn4O89029 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn4O89029 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Matn4O89029 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn4O89029 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Matn4O89029 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.72■□□□□ 0.59
Matn4O89029 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Matn4O89029 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn4O89029 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn4O89029 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn4O89029 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Matn4O89029 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn4O89029 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn4O89029 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn4O89029 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Matn4O89029 Gm43530-201ENSMUST00000195920 274 ntBASIC18.71■□□□□ 0.59
Matn4O89029 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Matn4O89029 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Matn4O89029 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn4O89029 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Matn4O89029 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn4O89029 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn4O89029 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Matn4O89029 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Matn4O89029 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Matn4O89029 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Matn4O89029 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Matn4O89029 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Matn4O89029 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Matn4O89029 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Matn4O89029 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Matn4O89029 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Matn4O89029 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn4O89029 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn4O89029 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Matn4O89029 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn4O89029 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.68■□□□□ 0.58
Matn4O89029 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.68■□□□□ 0.58
Matn4O89029 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn4O89029 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn4O89029 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn4O89029 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Matn4O89029 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Matn4O89029 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Matn4O89029 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.67■□□□□ 0.58
Matn4O89029 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Matn4O89029 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Matn4O89029 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Matn4O89029 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.67■□□□□ 0.58
Matn4O89029 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.67■□□□□ 0.58
Matn4O89029 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Matn4O89029 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Matn4O89029 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Matn4O89029 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Matn4O89029 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Matn4O89029 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.66■□□□□ 0.58
Matn4O89029 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms