Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac3O88895 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.62■□□□□ 0.41
Hdac3O88895 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac3O88895 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Hdac3O88895 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac3O88895 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.62■□□□□ 0.41
Hdac3O88895 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac3O88895 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hdac3O88895 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac3O88895 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Hdac3O88895 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.6■□□□□ 0.41
Hdac3O88895 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac3O88895 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac3O88895 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac3O88895 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac3O88895 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac3O88895 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hdac3O88895 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.59■□□□□ 0.41
Hdac3O88895 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hdac3O88895 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hdac3O88895 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.59■□□□□ 0.41
Hdac3O88895 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hdac3O88895 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac3O88895 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac3O88895 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac3O88895 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hdac3O88895 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac3O88895 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac3O88895 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.58■□□□□ 0.4
Hdac3O88895 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.58■□□□□ 0.4
Hdac3O88895 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hdac3O88895 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hdac3O88895 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.57■□□□□ 0.4
Hdac3O88895 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.57■□□□□ 0.4
Hdac3O88895 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac3O88895 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.56■□□□□ 0.4
Hdac3O88895 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Hdac3O88895 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Hdac3O88895 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac3O88895 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
Hdac3O88895 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Hdac3O88895 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.55■□□□□ 0.4
Hdac3O88895 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.55■□□□□ 0.4
Hdac3O88895 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Hdac3O88895 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac3O88895 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.54■□□□□ 0.4
Hdac3O88895 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac3O88895 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac3O88895 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hdac3O88895 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac3O88895 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms