Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Becn1O88597 Gm5921-201ENSMUST00000075898 882 ntBASIC22.54■■□□□ 1.2
Becn1O88597 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Becn1O88597 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Becn1O88597 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Becn1O88597 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Becn1O88597 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Becn1O88597 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Becn1O88597 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Becn1O88597 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Becn1O88597 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Becn1O88597 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Becn1O88597 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Becn1O88597 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Becn1O88597 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Becn1O88597 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Becn1O88597 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Becn1O88597 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Becn1O88597 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Becn1O88597 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Becn1O88597 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
Becn1O88597 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Becn1O88597 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Becn1O88597 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.51■■□□□ 1.19
Becn1O88597 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.51■■□□□ 1.19
Becn1O88597 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Becn1O88597 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Becn1O88597 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Becn1O88597 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.5■■□□□ 1.19
Becn1O88597 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
Becn1O88597 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Becn1O88597 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Becn1O88597 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Becn1O88597 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Becn1O88597 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Becn1O88597 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Becn1O88597 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Becn1O88597 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Becn1O88597 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Becn1O88597 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Becn1O88597 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Becn1O88597 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Becn1O88597 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Becn1O88597 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.48■■□□□ 1.19
Becn1O88597 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Becn1O88597 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Becn1O88597 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Becn1O88597 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Becn1O88597 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Becn1O88597 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Becn1O88597 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Becn1O88597 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Becn1O88597 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.47■■□□□ 1.19
Becn1O88597 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.47■■□□□ 1.19
Becn1O88597 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.47■■□□□ 1.19
Becn1O88597 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Becn1O88597 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Becn1O88597 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Becn1O88597 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Becn1O88597 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Becn1O88597 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Becn1O88597 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Becn1O88597 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.46■■□□□ 1.19
Becn1O88597 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Becn1O88597 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Becn1O88597 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Becn1O88597 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Becn1O88597 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Becn1O88597 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Becn1O88597 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
Becn1O88597 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Becn1O88597 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Becn1O88597 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.45■■□□□ 1.18
Becn1O88597 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Becn1O88597 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Becn1O88597 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Becn1O88597 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Becn1O88597 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Becn1O88597 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.44■■□□□ 1.18
Becn1O88597 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Becn1O88597 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Becn1O88597 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms