Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cldn1O88551 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.93■□□□□ 0.3
Cldn1O88551 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cldn1O88551 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cldn1O88551 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Gm12933-201ENSMUST00000120203 872 ntBASIC16.92■□□□□ 0.3
Cldn1O88551 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.92■□□□□ 0.3
Cldn1O88551 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cldn1O88551 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn1O88551 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn1O88551 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn1O88551 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cldn1O88551 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.91■□□□□ 0.3
Cldn1O88551 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn1O88551 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn1O88551 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn1O88551 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn1O88551 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn1O88551 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cldn1O88551 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn1O88551 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.9■□□□□ 0.3
Cldn1O88551 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.9■□□□□ 0.3
Cldn1O88551 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
Cldn1O88551 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.89■□□□□ 0.3
Cldn1O88551 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cldn1O88551 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Cldn1O88551 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Gm11421-201ENSMUST00000122124 294 ntBASIC16.89■□□□□ 0.29
Cldn1O88551 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Cldn1O88551 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cldn1O88551 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cldn1O88551 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.89■□□□□ 0.29
Cldn1O88551 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn1O88551 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 Nespas-201ENSMUST00000143738 1083 ntBASIC16.88■□□□□ 0.29
Cldn1O88551 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.88■□□□□ 0.29
Cldn1O88551 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.88■□□□□ 0.29
Cldn1O88551 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cldn1O88551 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cldn1O88551 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cldn1O88551 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Cldn1O88551 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn1O88551 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.88■□□□□ 0.29
Cldn1O88551 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cldn1O88551 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cldn1O88551 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cldn1O88551 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Cldn1O88551 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Gm9988-201ENSMUST00000069786 435 ntBASIC16.87■□□□□ 0.29
Cldn1O88551 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cldn1O88551 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn1O88551 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cldn1O88551 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cldn1O88551 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldn1O88551 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms