Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.62■□□□□ 0.73
Cacna1hO88427 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Cacna1hO88427 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1hO88427 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Cacna1hO88427 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.61■□□□□ 0.73
Cacna1hO88427 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cacna1hO88427 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.61■□□□□ 0.73
Cacna1hO88427 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna1hO88427 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.61■□□□□ 0.73
Cacna1hO88427 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1hO88427 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna1hO88427 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.59■□□□□ 0.73
Cacna1hO88427 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.59■□□□□ 0.73
Cacna1hO88427 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cacna1hO88427 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1hO88427 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1hO88427 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1hO88427 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cacna1hO88427 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cacna1hO88427 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1hO88427 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.58■□□□□ 0.72
Cacna1hO88427 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacna1hO88427 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1hO88427 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1hO88427 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1hO88427 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1hO88427 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.57■□□□□ 0.72
Cacna1hO88427 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1hO88427 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1hO88427 Gm6420-201ENSMUST00000193885 723 ntBASIC19.57■□□□□ 0.72
Cacna1hO88427 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1hO88427 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacna1hO88427 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1hO88427 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.56■□□□□ 0.72
Cacna1hO88427 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.56■□□□□ 0.72
Cacna1hO88427 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.56■□□□□ 0.72
Cacna1hO88427 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.56■□□□□ 0.72
Cacna1hO88427 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1hO88427 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1hO88427 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1hO88427 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1hO88427 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1hO88427 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacna1hO88427 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1hO88427 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1hO88427 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cacna1hO88427 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.55■□□□□ 0.72
Cacna1hO88427 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.55■□□□□ 0.72
Cacna1hO88427 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cacna1hO88427 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cacna1hO88427 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cacna1hO88427 Gm13534-201ENSMUST00000121169 513 ntBASIC19.55■□□□□ 0.72
Cacna1hO88427 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.55■□□□□ 0.72
Cacna1hO88427 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1hO88427 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.54■□□□□ 0.72
Cacna1hO88427 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1hO88427 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1hO88427 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1hO88427 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.54■□□□□ 0.72
Cacna1hO88427 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.54■□□□□ 0.72
Cacna1hO88427 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.54■□□□□ 0.72
Cacna1hO88427 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1hO88427 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.53■□□□□ 0.72
Cacna1hO88427 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1hO88427 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1hO88427 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cacna1hO88427 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacna1hO88427 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1hO88427 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1hO88427 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1hO88427 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1hO88427 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1hO88427 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Cacna1hO88427 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cacna1hO88427 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.52■□□□□ 0.72
Cacna1hO88427 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1hO88427 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.52■□□□□ 0.72
Cacna1hO88427 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cacna1hO88427 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1hO88427 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.51■□□□□ 0.71
Cacna1hO88427 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1hO88427 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1hO88427 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.51■□□□□ 0.71
Cacna1hO88427 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1hO88427 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1hO88427 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cacna1hO88427 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1hO88427 Gm11249-201ENSMUST00000117071 859 ntBASIC19.5■□□□□ 0.71
Cacna1hO88427 Gm6433-201ENSMUST00000118634 875 ntBASIC19.5■□□□□ 0.71
Cacna1hO88427 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cacna1hO88427 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cacna1hO88427 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms