Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.95■□□□□ 0.62
Tgfbr3O88393 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tgfbr3O88393 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tgfbr3O88393 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tgfbr3O88393 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tgfbr3O88393 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tgfbr3O88393 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.94■□□□□ 0.62
Tgfbr3O88393 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tgfbr3O88393 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tgfbr3O88393 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tgfbr3O88393 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tgfbr3O88393 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.92■□□□□ 0.62
Tgfbr3O88393 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tgfbr3O88393 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tgfbr3O88393 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tgfbr3O88393 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tgfbr3O88393 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tgfbr3O88393 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tgfbr3O88393 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tgfbr3O88393 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tgfbr3O88393 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tgfbr3O88393 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tgfbr3O88393 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.9■□□□□ 0.62
Tgfbr3O88393 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.9■□□□□ 0.62
Tgfbr3O88393 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tgfbr3O88393 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Tgfbr3O88393 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.89■□□□□ 0.61
Tgfbr3O88393 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tgfbr3O88393 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tgfbr3O88393 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.89■□□□□ 0.61
Tgfbr3O88393 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tgfbr3O88393 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tgfbr3O88393 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tgfbr3O88393 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Tgfbr3O88393 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tgfbr3O88393 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tgfbr3O88393 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tgfbr3O88393 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tgfbr3O88393 Gm7514-201ENSMUST00000209475 934 ntBASIC18.88■□□□□ 0.61
Tgfbr3O88393 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.88■□□□□ 0.61
Tgfbr3O88393 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tgfbr3O88393 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tgfbr3O88393 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tgfbr3O88393 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.87■□□□□ 0.61
Tgfbr3O88393 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tgfbr3O88393 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tgfbr3O88393 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tgfbr3O88393 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Tgfbr3O88393 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tgfbr3O88393 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tgfbr3O88393 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tgfbr3O88393 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tgfbr3O88393 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tgfbr3O88393 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tgfbr3O88393 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tgfbr3O88393 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Tgfbr3O88393 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.83■□□□□ 0.6
Tgfbr3O88393 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.83■□□□□ 0.6
Tgfbr3O88393 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tgfbr3O88393 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms