Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cdh16O88338 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh16O88338 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh16O88338 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cdh16O88338 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh16O88338 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh16O88338 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh16O88338 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh16O88338 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh16O88338 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdh16O88338 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Cdh16O88338 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh16O88338 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdh16O88338 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh16O88338 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh16O88338 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh16O88338 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh16O88338 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cdh16O88338 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh16O88338 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh16O88338 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cdh16O88338 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh16O88338 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh16O88338 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.3■□□□□ 0.68
Cdh16O88338 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh16O88338 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh16O88338 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdh16O88338 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh16O88338 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh16O88338 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.3■□□□□ 0.68
Cdh16O88338 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh16O88338 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdh16O88338 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh16O88338 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdh16O88338 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.29■□□□□ 0.68
Cdh16O88338 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh16O88338 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh16O88338 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh16O88338 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh16O88338 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cdh16O88338 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cdh16O88338 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.28■□□□□ 0.68
Cdh16O88338 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Cdh16O88338 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh16O88338 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh16O88338 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh16O88338 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh16O88338 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh16O88338 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh16O88338 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.27■□□□□ 0.68
Cdh16O88338 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh16O88338 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Cdh16O88338 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh16O88338 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh16O88338 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
Cdh16O88338 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh16O88338 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh16O88338 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh16O88338 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh16O88338 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.26■□□□□ 0.67
Cdh16O88338 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh16O88338 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.26■□□□□ 0.67
Cdh16O88338 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh16O88338 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.26■□□□□ 0.67
Cdh16O88338 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.26■□□□□ 0.67
Cdh16O88338 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh16O88338 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cdh16O88338 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdh16O88338 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh16O88338 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh16O88338 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cdh16O88338 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.25■□□□□ 0.67
Cdh16O88338 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms