Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC26.22■■□□□ 1.79
Nid2O88322 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC26.22■■□□□ 1.79
Nid2O88322 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nid2O88322 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nid2O88322 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nid2O88322 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nid2O88322 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nid2O88322 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC26.21■■□□□ 1.79
Nid2O88322 Gm22240-201ENSMUST00000175225 82 ntBASIC26.21■■□□□ 1.79
Nid2O88322 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC26.21■■□□□ 1.79
Nid2O88322 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nid2O88322 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nid2O88322 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC26.2■■□□□ 1.79
Nid2O88322 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nid2O88322 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nid2O88322 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nid2O88322 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nid2O88322 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC26.2■■□□□ 1.78
Nid2O88322 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Nid2O88322 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Nid2O88322 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nid2O88322 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nid2O88322 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Nid2O88322 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Nid2O88322 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC26.19■■□□□ 1.78
Nid2O88322 Gm10252-201ENSMUST00000209541 832 ntBASIC26.19■■□□□ 1.78
Nid2O88322 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nid2O88322 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nid2O88322 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nid2O88322 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nid2O88322 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nid2O88322 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Nid2O88322 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC26.18■■□□□ 1.78
Nid2O88322 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
Nid2O88322 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC26.18■■□□□ 1.78
Nid2O88322 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Nid2O88322 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nid2O88322 Gm3807-201ENSMUST00000193520 1168 ntBASIC26.18■■□□□ 1.78
Nid2O88322 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC26.18■■□□□ 1.78
Nid2O88322 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nid2O88322 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nid2O88322 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nid2O88322 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nid2O88322 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nid2O88322 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nid2O88322 AC122428.2-201ENSMUST00000216321 1832 ntBASIC26.17■■□□□ 1.78
Nid2O88322 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nid2O88322 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Nid2O88322 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nid2O88322 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC26.16■■□□□ 1.78
Nid2O88322 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Nid2O88322 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Nid2O88322 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nid2O88322 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nid2O88322 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nid2O88322 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nid2O88322 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nid2O88322 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nid2O88322 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nid2O88322 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC26.15■■□□□ 1.78
Nid2O88322 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nid2O88322 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.15■■□□□ 1.78
Nid2O88322 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nid2O88322 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nid2O88322 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nid2O88322 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC26.14■■□□□ 1.78
Nid2O88322 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Nid2O88322 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC26.14■■□□□ 1.78
Nid2O88322 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Nid2O88322 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Nid2O88322 Gm26766-202ENSMUST00000227544 2347 ntBASIC26.14■■□□□ 1.78
Nid2O88322 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Nid2O88322 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Nid2O88322 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC26.14■■□□□ 1.77
Nid2O88322 Gm8520-201ENSMUST00000186517 868 ntBASIC26.14■■□□□ 1.77
Nid2O88322 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.14■■□□□ 1.77
Nid2O88322 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nid2O88322 Gm7290-201ENSMUST00000104990 617 ntBASIC26.13■■□□□ 1.77
Nid2O88322 Gm12918-201ENSMUST00000120234 636 ntBASIC26.13■■□□□ 1.77
Nid2O88322 Gm15710-201ENSMUST00000121821 636 ntBASIC26.13■■□□□ 1.77
Nid2O88322 Gm5075-201ENSMUST00000196916 622 ntBASIC26.13■■□□□ 1.77
Nid2O88322 Gm5408-201ENSMUST00000197998 747 ntBASIC26.13■■□□□ 1.77
Nid2O88322 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC26.13■■□□□ 1.77
Nid2O88322 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Nid2O88322 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC26.13■■□□□ 1.77
Nid2O88322 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC26.13■■□□□ 1.77
Nid2O88322 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nid2O88322 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nid2O88322 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nid2O88322 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nid2O88322 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nid2O88322 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nid2O88322 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nid2O88322 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nid2O88322 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nid2O88322 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nid2O88322 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC26.11■■□□□ 1.77
Nid2O88322 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Nid2O88322 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC26.11■■□□□ 1.77
Nid2O88322 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms