Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ubr1O70481 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr1O70481 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr1O70481 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Ubr1O70481 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Ubr1O70481 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr1O70481 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr1O70481 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Ubr1O70481 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr1O70481 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr1O70481 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC26.23■■□□□ 1.79
Ubr1O70481 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
Ubr1O70481 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ubr1O70481 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
Ubr1O70481 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Ubr1O70481 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ubr1O70481 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
Ubr1O70481 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
Ubr1O70481 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr1O70481 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ubr1O70481 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr1O70481 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC26.21■■□□□ 1.79
Ubr1O70481 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr1O70481 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr1O70481 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ubr1O70481 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Ubr1O70481 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
Ubr1O70481 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ubr1O70481 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
Ubr1O70481 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ubr1O70481 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ubr1O70481 Dmtn-209ENSMUST00000228295 2572 ntBASIC26.19■■□□□ 1.78
Ubr1O70481 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ubr1O70481 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ubr1O70481 Gm13146-201ENSMUST00000118508 780 ntBASIC26.19■■□□□ 1.78
Ubr1O70481 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ubr1O70481 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ubr1O70481 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ubr1O70481 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ubr1O70481 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ubr1O70481 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
Ubr1O70481 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ubr1O70481 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ubr1O70481 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC26.18■■□□□ 1.78
Ubr1O70481 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ubr1O70481 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr1O70481 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr1O70481 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr1O70481 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr1O70481 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr1O70481 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr1O70481 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ubr1O70481 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ubr1O70481 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC26.16■■□□□ 1.78
Ubr1O70481 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC26.16■■□□□ 1.78
Ubr1O70481 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC26.16■■□□□ 1.78
Ubr1O70481 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ubr1O70481 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ubr1O70481 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ubr1O70481 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr1O70481 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC26.15■■□□□ 1.78
Ubr1O70481 Gm13148-201ENSMUST00000118892 745 ntBASIC26.15■■□□□ 1.78
Ubr1O70481 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr1O70481 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr1O70481 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr1O70481 AC112142.1-201ENSMUST00000228796 918 ntBASIC26.15■■□□□ 1.78
Ubr1O70481 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Ubr1O70481 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr1O70481 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ubr1O70481 Gm42911-201ENSMUST00000199360 1630 ntBASIC26.15■■□□□ 1.78
Ubr1O70481 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ubr1O70481 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ubr1O70481 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ubr1O70481 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
Ubr1O70481 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
Ubr1O70481 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC26.13■■□□□ 1.77
Ubr1O70481 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ubr1O70481 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ubr1O70481 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ubr1O70481 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ubr1O70481 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ubr1O70481 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ubr1O70481 Gm7514-201ENSMUST00000209475 934 ntBASIC26.12■■□□□ 1.77
Ubr1O70481 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ubr1O70481 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr1O70481 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr1O70481 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr1O70481 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC26.11■■□□□ 1.77
Ubr1O70481 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr1O70481 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC26.11■■□□□ 1.77
Ubr1O70481 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr1O70481 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC26.11■■□□□ 1.77
Ubr1O70481 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ubr1O70481 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr1O70481 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr1O70481 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr1O70481 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr1O70481 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr1O70481 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Ubr1O70481 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms