Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Gm13238-201ENSMUST00000117655 780 ntBASIC16.46■□□□□ 0.23
Gfi1bO70237 Gm43566-201ENSMUST00000196851 808 ntBASIC16.46■□□□□ 0.23
Gfi1bO70237 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.46■□□□□ 0.23
Gfi1bO70237 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfi1bO70237 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfi1bO70237 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gfi1bO70237 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfi1bO70237 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfi1bO70237 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfi1bO70237 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gfi1bO70237 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gfi1bO70237 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gfi1bO70237 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gfi1bO70237 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Gfi1bO70237 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfi1bO70237 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Gfi1bO70237 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Gfi1bO70237 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.45■□□□□ 0.22
Gfi1bO70237 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gfi1bO70237 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gfi1bO70237 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gfi1bO70237 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfi1bO70237 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gfi1bO70237 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Gfi1bO70237 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfi1bO70237 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gfi1bO70237 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Gfi1bO70237 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gfi1bO70237 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gfi1bO70237 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Gfi1bO70237 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gfi1bO70237 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gfi1bO70237 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gfi1bO70237 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Gfi1bO70237 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gfi1bO70237 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gfi1bO70237 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gfi1bO70237 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Gfi1bO70237 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gfi1bO70237 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gfi1bO70237 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.43■□□□□ 0.22
Gfi1bO70237 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.43■□□□□ 0.22
Gfi1bO70237 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Gfi1bO70237 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.43■□□□□ 0.22
Gfi1bO70237 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gfi1bO70237 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gfi1bO70237 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gfi1bO70237 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.42■□□□□ 0.22
Gfi1bO70237 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Gfi1bO70237 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gfi1bO70237 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.42■□□□□ 0.22
Gfi1bO70237 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.41■□□□□ 0.22
Gfi1bO70237 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.41■□□□□ 0.22
Gfi1bO70237 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gfi1bO70237 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gfi1bO70237 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gfi1bO70237 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Gfi1bO70237 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gfi1bO70237 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Gfi1bO70237 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gfi1bO70237 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gfi1bO70237 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.4■□□□□ 0.22
Gfi1bO70237 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gfi1bO70237 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
Gfi1bO70237 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gfi1bO70237 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.4■□□□□ 0.22
Gfi1bO70237 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.4■□□□□ 0.22
Gfi1bO70237 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gfi1bO70237 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.4■□□□□ 0.22
Gfi1bO70237 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gfi1bO70237 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gfi1bO70237 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gfi1bO70237 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gfi1bO70237 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gfi1bO70237 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gfi1bO70237 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Gfi1bO70237 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Gfi1bO70237 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Gfi1bO70237 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.39■□□□□ 0.21
Gfi1bO70237 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gfi1bO70237 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gfi1bO70237 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gfi1bO70237 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gfi1bO70237 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gfi1bO70237 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gfi1bO70237 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.39■□□□□ 0.21
Gfi1bO70237 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Gfi1bO70237 Rarb-207ENSMUST00000225921 2756 ntBASIC16.38■□□□□ 0.21
Gfi1bO70237 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Gfi1bO70237 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gfi1bO70237 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gfi1bO70237 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms