Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.94■□□□□ 0.46
Alx3O70137 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.94■□□□□ 0.46
Alx3O70137 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Alx3O70137 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.94■□□□□ 0.46
Alx3O70137 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Alx3O70137 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx3O70137 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.94■□□□□ 0.46
Alx3O70137 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx3O70137 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx3O70137 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx3O70137 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx3O70137 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx3O70137 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx3O70137 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx3O70137 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx3O70137 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx3O70137 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx3O70137 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx3O70137 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx3O70137 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.92■□□□□ 0.46
Alx3O70137 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx3O70137 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx3O70137 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Alx3O70137 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.92■□□□□ 0.46
Alx3O70137 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Alx3O70137 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx3O70137 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Alx3O70137 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Alx3O70137 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.91■□□□□ 0.46
Alx3O70137 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Alx3O70137 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.91■□□□□ 0.46
Alx3O70137 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx3O70137 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx3O70137 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx3O70137 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.9■□□□□ 0.46
Alx3O70137 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx3O70137 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.9■□□□□ 0.46
Alx3O70137 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx3O70137 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx3O70137 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Alx3O70137 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Alx3O70137 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Alx3O70137 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx3O70137 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.89■□□□□ 0.45
Alx3O70137 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Alx3O70137 Gm9870-201ENSMUST00000063874 645 ntBASIC17.89■□□□□ 0.45
Alx3O70137 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx3O70137 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.89■□□□□ 0.45
Alx3O70137 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx3O70137 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx3O70137 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx3O70137 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx3O70137 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx3O70137 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx3O70137 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx3O70137 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Alx3O70137 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx3O70137 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx3O70137 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx3O70137 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx3O70137 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx3O70137 Gm7417-201ENSMUST00000192950 473 ntBASIC17.87■□□□□ 0.45
Alx3O70137 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx3O70137 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Alx3O70137 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx3O70137 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx3O70137 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Alx3O70137 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Alx3O70137 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Alx3O70137 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
Alx3O70137 Gm15546-201ENSMUST00000122095 826 ntBASIC17.86■□□□□ 0.45
Alx3O70137 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.86■□□□□ 0.45
Alx3O70137 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Alx3O70137 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Alx3O70137 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.86■□□□□ 0.45
Alx3O70137 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Alx3O70137 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Alx3O70137 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Alx3O70137 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Alx3O70137 Gm15039-201ENSMUST00000118914 875 ntBASIC17.85■□□□□ 0.45
Alx3O70137 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Alx3O70137 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms