Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sigmar1O55242 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sigmar1O55242 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sigmar1O55242 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sigmar1O55242 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sigmar1O55242 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sigmar1O55242 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sigmar1O55242 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sigmar1O55242 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sigmar1O55242 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sigmar1O55242 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Gm37136-201ENSMUST00000194368 194 ntBASIC13.66□□□□□ -0.22
Sigmar1O55242 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sigmar1O55242 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sigmar1O55242 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Sigmar1O55242 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Gm24970-201ENSMUST00000175582 82 ntBASIC13.65□□□□□ -0.22
Sigmar1O55242 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sigmar1O55242 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sigmar1O55242 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sigmar1O55242 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sigmar1O55242 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sigmar1O55242 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sigmar1O55242 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sigmar1O55242 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sigmar1O55242 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sigmar1O55242 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sigmar1O55242 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sigmar1O55242 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sigmar1O55242 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sigmar1O55242 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sigmar1O55242 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sigmar1O55242 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sigmar1O55242 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sigmar1O55242 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sigmar1O55242 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sigmar1O55242 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sigmar1O55242 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC13.63□□□□□ -0.23
Sigmar1O55242 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sigmar1O55242 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sigmar1O55242 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sigmar1O55242 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.62□□□□□ -0.23
Sigmar1O55242 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sigmar1O55242 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sigmar1O55242 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sigmar1O55242 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sigmar1O55242 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sigmar1O55242 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms